RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 WASH4PA8MWX3 477 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 BUB1O43683 1085 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 KDELR3O43731 214 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 MIPP30301 263 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 DRD3P35462 400 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 PCK1P35558 622 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 NUDT1P36639 197 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 GRIA4P48058 902 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 C21orf59P57076 290 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 SNRPD1P62314 119 aaKnown RBP13.76□□□□□ -0.21
LMO4-203ENST00000489303 RACK1P63244 317 aaKnown RBP13.76□□□□□ -0.21
LMO4-203ENST00000489303 CNTN1Q12860 1018 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 SLC14A1Q13336 389 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 PIGHQ14442 188 aaPredicted RBP13.76□□□□□ -0.21
LMO4-203ENST00000489303 POM121L1PQ3SYA9 428 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 PARP15Q460N3 678 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 SLC45A4Q5BKX6 768 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 DPY19L3Q6ZPD9 716 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 PRPF39Q86UA1 669 aaKnown RBP13.76□□□□□ -0.21
LMO4-203ENST00000489303 PNPLA1Q8N8W4 532 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 KDF1Q8NAX2 398 aaPredicted RBP13.76□□□□□ -0.21
LMO4-203ENST00000489303 GRIN3AQ8TCU5 1115 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 CASKIN2Q8WXE0 1202 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 ISG20Q96AZ6 181 aaKnown RBP13.76□□□□□ -0.21
LMO4-203ENST00000489303 HEPHQ9BQS7 1158 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 SNRNP25Q9BV90 132 aaKnown RBP13.76□□□□□ -0.21
LMO4-203ENST00000489303 THAP2Q9H0W7 228 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 TM9SF3Q9HD45 589 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 DNAAF2Q9NVR5 837 aaKnown RBP13.76□□□□□ -0.21
LMO4-203ENST00000489303 GPATCH2LQ9NWQ4 482 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 NEU3Q9UQ49 428 aa13.76□□□□□ -0.21
LMO4-203ENST00000489303 FCF1Q9Y324 198 aaKnown RBP13.76□□□□□ -0.21
LMO4-203ENST00000489303 NUMA1Q14980 2115 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 A0A087X0T9 212 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 A0A1B0GVT2 93 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 RASA4BC9J798 803 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 RASA4O43374 803 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 PLRG1O43660 514 aaKnown RBP13.75□□□□□ -0.21
LMO4-203ENST00000489303 IGHV4-34P06331 123 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 FAM228BP0C875 321 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 HNRNPH3P31942 346 aaKnown RBP13.75□□□□□ -0.21
LMO4-203ENST00000489303 CSNK1EP49674 416 aaKnown RBP13.75□□□□□ -0.21
LMO4-203ENST00000489303 RAD51Q06609 339 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 BOLA3Q53S33 107 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 ARSIQ5FYB1 569 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 PPP6R3Q5H9R7 873 aaPredicted RBP13.75□□□□□ -0.21
LMO4-203ENST00000489303 VSTM4Q8IW00 320 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 PLPP6Q8IY26 295 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 UMODL1-AS1Q8N2C9 162 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 CHST14Q8NCH0 376 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 C1orf216Q8TAB5 229 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 LRIG1Q96JA1 1093 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 NUP85Q9BW27 656 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 TRIM7Q9C029 511 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 GAREM1Q9H706 876 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 ZWILCHQ9H900 591 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 PREBQ9HCU5 417 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 AASDHPPTQ9NRN7 309 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 ARHGAP20Q9P2F6 1191 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 HECAQ9UBI9 543 aaPredicted RBP13.75□□□□□ -0.21
LMO4-203ENST00000489303 IP6K2Q9UHH9 426 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 ANAPC7Q9UJX3 599 aa13.75□□□□□ -0.21
LMO4-203ENST00000489303 ARHGAP42A6NI28 874 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 UPK3BL1B0FP48 263 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 UPK3BL2E5RIL1 263 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 MYO1FO00160 1098 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 PLK4O00444 970 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 LRCH4O75427 683 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 LEFTY1O75610 366 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 GSRP00390 522 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 CYP1A2P05177 515 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 CTSLP07711 333 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 HOXB3P14651 431 aaPredicted RBP13.74□□□□□ -0.21
LMO4-203ENST00000489303 EIF4A3P38919 411 aaKnown RBP13.74□□□□□ -0.21
LMO4-203ENST00000489303 ARL4AP40617 200 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 CCNHP51946 323 aaPredicted RBP13.74□□□□□ -0.21
LMO4-203ENST00000489303 NDST2P52849 883 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 METAP1P53582 386 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 SERINC3Q13530 473 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 HNRNPDQ14103 355 aaKnown RBP13.74□□□□□ -0.21
LMO4-203ENST00000489303 INO80DQ53TQ3 878 aaPredicted RBP13.74□□□□□ -0.21
LMO4-203ENST00000489303 AGBL4Q5VU57 503 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 NEK5Q6P3R8 708 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 FBXL19Q6PCT2 694 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 LAYNQ6UX15 382 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 RFX8Q6ZV50 586 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 ERN2Q76MJ5 926 aaKnown RBP13.74□□□□□ -0.21
LMO4-203ENST00000489303 ARFGAP1Q8N6T3 406 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 OR2AP1Q8NGE2 309 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 CTNNBL1Q8WYA6 563 aaPredicted RBP13.74□□□□□ -0.21
LMO4-203ENST00000489303 FAM131CQ96AQ9 280 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 HMCESQ96FZ2 354 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 SERAC1Q96JX3 654 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 DNAJC7Q99615 494 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 HDAC8Q9BY41 377 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 TM6SF2Q9BZW4 377 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 ZDHHC6Q9H6R6 413 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 LCMT1Q9UIC8 334 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 DMTF1Q9Y222 760 aa13.74□□□□□ -0.21
LMO4-203ENST00000489303 ANKRD6Q9Y2G4 727 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms