RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PQLC3Q8N755 202 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 NETO2Q8NC67 525 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 OR7D4Q8NG98 312 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 WFIKKN2Q8TEU8 576 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 SORCS1Q8WY21 1168 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 STMN4Q9H169 189 aaPredicted RBP19.74■□□□□ 0.75
CCM2-216ENST00000488727 MUC3BQ9H195 1237 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 DRG1Q9Y295 367 aaKnown RBP19.74■□□□□ 0.75
CCM2-216ENST00000488727 ZNF487B1APH4 448 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 TNFRSF4P43489 277 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 KIR2DL1P43626 348 aaPredicted RBP19.73■□□□□ 0.75
CCM2-216ENST00000488727 SEC13P55735 322 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 OXCT1P55809 520 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 SLC12A1Q13621 1099 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 TAZQ16635 292 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 ODF2Q5BJF6 829 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 TFDP3Q5H9I0 405 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 Q6ZS52 159 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 CEP128Q6ZU80 1094 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 CELF6Q96J87 481 aaKnown RBP19.73■□□□□ 0.75
CCM2-216ENST00000488727 RNF157Q96PX1 679 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 OSBPL6Q9BZF3 934 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 CIPCQ9C0C6 399 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 LMAN1LQ9HAT1 526 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 ZDHHC4Q9NPG8 344 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 C11orf16Q9NQ32 467 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 ELOVL2Q9NXB9 296 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 ANAPC5Q9UJX4 755 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 VPS28Q9UK41 221 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 RRP15Q9Y3B9 282 aaKnown RBP19.73■□□□□ 0.75
CCM2-216ENST00000488727 SIT1Q9Y3P8 196 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 PI15O43692 258 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 RAMP2O60895 175 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 ACVRL1P37023 503 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 ADCY8P40145 1251 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 CCT5P48643 541 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 DMC1Q14565 340 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 NCBP2-AS2Q69YL0 99 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 ZNF783Q6ZMS7 281 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 TP53INP2Q8IXH6 220 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 ARHGEF2Q92974 986 aaKnown RBP19.73■□□□□ 0.75
CCM2-216ENST00000488727 NKD2Q969F2 451 aaPredicted RBP19.73■□□□□ 0.75
CCM2-216ENST00000488727 TTC17Q96AE7 1141 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 CENPTQ96BT3 561 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 FRMD8P1Q9BZ68 369 aaPredicted RBP19.73■□□□□ 0.75
CCM2-216ENST00000488727 STARD13Q9Y3M8 1113 aa19.73■□□□□ 0.75
CCM2-216ENST00000488727 EBAG9O00559 213 aa19.72■□□□□ 0.75
CCM2-216ENST00000488727 NDUFAB1O14561 156 aa19.72■□□□□ 0.75
CCM2-216ENST00000488727 RGS16O15492 202 aaPredicted RBP19.72■□□□□ 0.75
CCM2-216ENST00000488727 KRT10P13645 584 aa19.72■□□□□ 0.75
CCM2-216ENST00000488727 CTSOP43234 321 aaPredicted RBP19.72■□□□□ 0.75
CCM2-216ENST00000488727 EIF4HQ15056 248 aaKnown RBP19.72■□□□□ 0.75
CCM2-216ENST00000488727 FBXO43Q4G163 708 aa19.72■□□□□ 0.75
CCM2-216ENST00000488727 DGKKQ5KSL6 1271 aa19.72■□□□□ 0.75
CCM2-216ENST00000488727 UBAP2Q5T6F2 1119 aaKnown RBP19.72■□□□□ 0.75
CCM2-216ENST00000488727 AFMIDQ63HM1 303 aa19.72■□□□□ 0.75
CCM2-216ENST00000488727 EGFLAMQ63HQ2 1017 aa19.72■□□□□ 0.75
CCM2-216ENST00000488727 NUDT18Q6ZVK8 323 aa19.72■□□□□ 0.75
CCM2-216ENST00000488727 ARHGAP12Q8IWW6 846 aa19.72■□□□□ 0.75
CCM2-216ENST00000488727 CLDN23Q96B33 292 aa19.72■□□□□ 0.75
CCM2-216ENST00000488727 MAGEH1Q9H213 219 aa19.72■□□□□ 0.75
CCM2-216ENST00000488727 ATXN2Q99700 1313 aaKnown RBP19.72■□□□□ 0.75
CCM2-216ENST00000488727 FAM86C2PA6NEL3 165 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 RASA4BC9J798 803 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 NDC80O14777 642 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 RASA4O43374 803 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 SNAP91O60641 907 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 DCNP07585 359 aaKnown RBP19.71■□□□□ 0.75
CCM2-216ENST00000488727 POLR2EP19388 210 aaKnown RBP19.71■□□□□ 0.75
CCM2-216ENST00000488727 GLDCP23378 1020 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 LRRC32Q14392 662 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 POLD3Q15054 466 aaPredicted RBP19.71■□□□□ 0.75
CCM2-216ENST00000488727 PTPRNQ16849 979 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 C2orf27AQ580R0 203 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 IZUMO3Q5VZ72 239 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 HIBCHQ6NVY1 386 aaPredicted RBP19.71■□□□□ 0.75
CCM2-216ENST00000488727 PKN3Q6P5Z2 889 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 CCDC25Q86WR0 208 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 SPATS2Q86XZ4 545 aaKnown RBP19.71■□□□□ 0.75
CCM2-216ENST00000488727 ALLCQ8N6M5 410 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 PLD5Q8N7P1 536 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 CYB5D2Q8WUJ1 264 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 PBXIP1Q96AQ6 731 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 HMCESQ96FZ2 354 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 ACOX2Q99424 681 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 SLC39A8Q9C0K1 460 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 FAM107BQ9H098 131 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 DONSONQ9NYP3 566 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 CUL9Q8IWT3 2517 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 RASGRF2O14827 1237 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 MFSD11O43934 449 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 TTC4O95801 387 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 FAM107AO95990 144 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 AOC1P19801 751 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 TIE1P35590 1138 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 MMP13P45452 471 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 NDST2P52849 883 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 YBEYP58557 167 aaPredicted RBP19.71■□□□□ 0.75
CCM2-216ENST00000488727 GAS6Q14393 721 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 TRIP13Q15645 432 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms