RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 SLC39A8Q9C0K1 460 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 PDFQ9HBH1 243 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 TM9SF3Q9HD45 589 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 DONSONQ9NYP3 566 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 IL36AQ9UHA7 158 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 CACNA1AO00555 2505 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 AKR1B10O60218 316 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 GJB3O75712 270 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 TMCC1O94876 653 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 SYPP08247 313 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 H2AFZP0C0S5 128 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 MAPK8P45983 427 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 RECQLP46063 649 aaPredicted RBP16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 CSNK1EP49674 416 aaKnown RBP16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 DNA2P51530 1060 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 PPP2CBP62714 309 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 PPP2CAP67775 309 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 GRIK2Q13002 908 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 INO80DQ53TQ3 878 aaPredicted RBP16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 H2AFVQ71UI9 128 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 CNGA4Q8IV77 575 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 NPWQ8N729 165 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 NETO2Q8NC67 525 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 GRIN3AQ8TCU5 1115 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 TEKT4Q8WW24 435 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 CELF6Q96J87 481 aaKnown RBP16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 SPTLC3Q9NUV7 552 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 UVRAGQ9P2Y5 699 aa16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 HECAQ9UBI9 543 aaPredicted RBP16.23■□□□□ 0.19
CTDSP1-209ENST00000488627 TBC1D3DA0A087WVF3 549 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 TBC1D3IA0A087WXS9 549 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 TBC1D3EA0A087X179 549 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 TBC1D3KA0A087X1G2 549 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 TBC1D3FA6NER0 549 aaPredicted RBP16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 TBC1D3LB9A6J9 549 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 J3KR12 359 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 KPNA3O00505 521 aaPredicted RBP16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 WNT9AO14904 365 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 GSRP00390 522 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 TMEM253P0C7T8 217 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 TBC1D3HP0C7X1 549 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 IL4RP24394 825 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 GKP32189 559 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 PAPOLAP51003 745 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 ARSEP51690 589 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 ZNF75DP51815 510 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 CYTH1Q15438 398 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 MYLK3Q32MK0 819 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 TBC1D3GQ6DHY5 549 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 TBC1D3CQ6IPX1 549 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 TP53INP2Q8IXH6 220 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 TBC1D3Q8IZP1 549 aaPredicted RBP16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 MINDY1Q8N5J2 469 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 OR2AP1Q8NGE2 309 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 FAM71BQ8TC56 605 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 CASKIN2Q8WXE0 1202 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 CTNNBL1Q8WYA6 563 aaPredicted RBP16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 TSC1Q92574 1164 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 HSPH1Q92598 858 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 CCDC42Q96M95 316 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 GTPBP2Q9BX10 602 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 HDAC8Q9BY41 377 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 ZDHHC5Q9C0B5 715 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 DEF6Q9H4E7 631 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 ZWILCHQ9H900 591 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 PCDH18Q9HCL0 1135 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 DNAAF2Q9NVR5 837 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 CTTNBP2NLQ9P2B4 639 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 MFHAS1Q9Y4C4 1052 aa16.22■□□□□ 0.19
CTDSP1-209ENST00000488627 PI4KAP42356 2102 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 A0A1B0GVT2 93 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 MED19A0JLT2 244 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 DAPK3O43293 454 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 PRAMEF11O60813 436 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 PROSCO94903 275 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 POP4O95707 220 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 AMPD1P23109 780 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 AFF3P51826 1226 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 SNRPD1P62314 119 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 RACK1P63244 317 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 ATP13A4Q4VNC1 1196 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 ATXN7L2Q5T6C5 722 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 LAYNQ6UX15 382 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 ERN2Q76MJ5 926 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 TRIM69Q86WT6 500 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 ZNF354CQ86Y25 554 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 OR6K2Q8NGY2 324 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 MRFAP1L1Q96HT8 127 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 LRIG1Q96JA1 1093 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 CSPG4P5Q96PW8 444 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 ETNK2Q9NVF9 386 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 LHX3Q9UBR4 397 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 TPX2Q9ULW0 747 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 SPTBN2O15020 2390 aa16.21■□□□□ 0.19
CTDSP1-209ENST00000488627 CACNA1EQ15878 2313 aa16.2■□□□□ 0.18
CTDSP1-209ENST00000488627 CHD5Q8TDI0 1954 aa16.2■□□□□ 0.18
CTDSP1-209ENST00000488627 PCDH15Q96QU1 1955 aa16.2■□□□□ 0.18
CTDSP1-209ENST00000488627 CNOT1A5YKK6 2376 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-209ENST00000488627 ARHGAP42A6NI28 874 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms