RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 GPR65Q8IYL9 337 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 TCEAL8Q8IYN2 117 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 KCTD6Q8NC69 237 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 EXD1Q8NHP7 514 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 DQX1Q8TE96 717 aaKnown RBP13.96□□□□□ -0.18
COPS7B-221ENST00000488111 DCAKDQ8WVC6 231 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 SNRNP25Q9BV90 132 aaKnown RBP13.96□□□□□ -0.18
COPS7B-221ENST00000488111 EMILIN2Q9BXX0 1053 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 C1orf21Q9H246 121 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 ACSS3Q9H6R3 686 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 INSL5Q9Y5Q6 135 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 FAM92AA1XBS5 289 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 PER2O15055 1255 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 MDM4O15151 490 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 MSI1O43347 362 aaKnown RBP13.95□□□□□ -0.18
COPS7B-221ENST00000488111 VCLP18206 1134 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 STIP1P31948 543 aaKnown RBP13.95□□□□□ -0.18
COPS7B-221ENST00000488111 CHN2P52757 468 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 HSF5Q4G112 596 aaPredicted RBP13.95□□□□□ -0.18
COPS7B-221ENST00000488111 LILRA6Q6PI73 481 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 B3GNT6Q6ZMB0 384 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 RCOR2Q8IZ40 523 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 RNF139Q8WU17 664 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 CASP10Q92851 521 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 SLITRK1Q96PX8 696 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 KLHL4Q9C0H6 718 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 DDX56Q9NY93 547 aaKnown RBP13.95□□□□□ -0.18
COPS7B-221ENST00000488111 DNPEPQ9ULA0 475 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 CHMP2BQ9UQN3 213 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 IRAK3Q9Y616 596 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 GOLGA8RI6L899 631 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 LPXNO60711 386 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 ETS1P14921 441 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 HMGA1P17096 107 aaKnown RBP13.95□□□□□ -0.18
COPS7B-221ENST00000488111 KDELR1P24390 212 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 CDH6P55285 790 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 UBE3AQ05086 875 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 TBL3Q12788 808 aaKnown RBP13.95□□□□□ -0.18
COPS7B-221ENST00000488111 PLD1Q13393 1074 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 PDK3Q15120 406 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 TBCCQ15814 346 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 ANKRD20A4Q4UJ75 823 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 PPP2R2DQ66LE6 453 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 RNF111Q6ZNA4 994 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 BNIPLQ7Z465 357 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 RBM23Q86U06 439 aaKnown RBP13.95□□□□□ -0.18
COPS7B-221ENST00000488111 ANKMY2Q8IV38 441 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 ATP11CQ8NB49 1132 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 KREMEN2Q8NCW0 462 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 KLF6Q99612 283 aaPredicted RBP13.95□□□□□ -0.18
COPS7B-221ENST00000488111 CALN1Q9BXU9 219 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 ANLNQ9NQW6 1124 aa13.95□□□□□ -0.18
COPS7B-221ENST00000488111 C3orf70A6NLC5 250 aaPredicted RBP13.94□□□□□ -0.18
COPS7B-221ENST00000488111 H3BNC9 293 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 BANF1O75531 89 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 ENDOD1O94919 500 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 ERFP50548 548 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 AQP4P55087 323 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 SLC18A2Q05940 514 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 MMRN1Q13201 1228 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 BOLA3Q53S33 107 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 SPOCD1Q6ZMY3 1216 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 DNAJB7Q7Z6W7 309 aaPredicted RBP13.94□□□□□ -0.18
COPS7B-221ENST00000488111 ALDH16A1Q8IZ83 802 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 PYROXD2Q8N2H3 581 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 CMASQ8NFW8 434 aaPredicted RBP13.94□□□□□ -0.18
COPS7B-221ENST00000488111 APOPT1Q96IL0 206 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 ZNF512Q96ME7 567 aaPredicted RBP13.94□□□□□ -0.18
COPS7B-221ENST00000488111 CCDC106Q9BWC9 280 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 DHX35Q9H5Z1 703 aaKnown RBP13.94□□□□□ -0.18
COPS7B-221ENST00000488111 SUDS3Q9H7L9 328 aaPredicted RBP13.94□□□□□ -0.18
COPS7B-221ENST00000488111 WDR6Q9NNW5 1121 aaKnown RBP13.94□□□□□ -0.18
COPS7B-221ENST00000488111 TLR8Q9NR97 1041 aaKnown RBP13.94□□□□□ -0.18
COPS7B-221ENST00000488111 MSRAQ9UJ68 235 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 DRG1Q9Y295 367 aaKnown RBP13.94□□□□□ -0.18
COPS7B-221ENST00000488111 MYO7AQ13402 2215 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 TNRC18O15417 2968 aaPredicted RBP13.94□□□□□ -0.18
COPS7B-221ENST00000488111 GBF1Q92538 1859 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 PATJQ8NI35 1801 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 A0A088AWK7 358 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 RFXAPO00287 272 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 GLUD1P00367 558 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 C8AP07357 584 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 CSH1P0DML2 217 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 CSH2P0DML3 217 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 CDK18Q07002 472 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 EFEMP1Q12805 493 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 DLG1Q12959 904 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 VEPH1Q14D04 833 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 PPP6R3Q5H9R7 873 aaPredicted RBP13.94□□□□□ -0.18
COPS7B-221ENST00000488111 SLC25A41Q8N5S1 370 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 RNF34Q969K3 372 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 TTLL2Q9BWV7 592 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 CCSER2Q9H7U1 834 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 USP29Q9HBJ7 922 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 PPARGC1AQ9UBK2 798 aaKnown RBP13.94□□□□□ -0.18
COPS7B-221ENST00000488111 ZNF148Q9UQR1 794 aa13.94□□□□□ -0.18
COPS7B-221ENST00000488111 EPOPA6NHQ4 379 aa13.93□□□□□ -0.18
COPS7B-221ENST00000488111 I6L893 689 aaPredicted RBP13.93□□□□□ -0.18
COPS7B-221ENST00000488111 ATP5BP06576 529 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms