RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 GALNT3Q14435 633 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 SLC18A3Q16572 532 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 TSTQ16762 297 aaKnown RBP3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 PLK5Q496M5 336 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 C5orf22Q49AR2 442 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 KIAA1755Q5JYT7 1200 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 WDR78Q5VTH9 848 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 FAM171A1Q5VUB5 890 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 NAPEPLDQ6IQ20 393 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 LRIG3Q6UXM1 1119 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 H1FNTQ75WM6 255 aaPredicted RBP3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 R3HCC1LQ7Z5L2 792 aaKnown RBP3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 MON1AQ86VX9 555 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 ARL14EPQ8N8R7 260 aaPredicted RBP3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 SETD9Q8NE22 299 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 TDRD7Q8NHU6 1098 aaKnown RBP3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 NFKBIDQ8NI38 313 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 UCMAQ8WVF2 138 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 VEZTQ9HBM0 779 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 MOV10Q9HCE1 1003 aaKnown RBP3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 SEMA4BQ9NPR2 832 aaPredicted RBP3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 MAP3K20Q9NYL2 800 aaKnown RBP3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 AASSQ9UDR5 926 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 DHDHQ9UQ10 334 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 CNPY2Q9Y2B0 182 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 A0A087X0M5 115 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 A0A1B0GX30 115 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 CXorf65A6NEN9 183 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 F5H0A9 414 aaPredicted RBP3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 H3BNX3 289 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 URODP06132 367 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 CHRNA5P30532 468 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 ARL1P40616 181 aaPredicted RBP3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 SKIV2L2P42285 1042 aaKnown RBP3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 CCR9P51686 369 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 EIF5P55010 431 aaKnown RBP3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 PTP4A2Q12974 167 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 PGM5Q15124 567 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 EARS2Q5JPH6 523 aaKnown RBP3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 INO80CQ6PI98 192 aaPredicted RBP3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 C18orf65Q6ZTR6 163 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 CYB5R4Q7L1T6 521 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 UBE2Q1Q7Z7E8 422 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 PCGF5Q86SE9 256 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 CHD1LQ86WJ1 897 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 GHDCQ8N2G8 530 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 PELI3Q8N2H9 469 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 TMEM217Q8N7C4 229 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 HSPH1Q92598 858 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 TEFMQ96QE5 360 aaKnown RBP3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 FRG2BQ96QU4 278 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 IFT27Q9BW83 186 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 FRMD8Q9BZ67 464 aaPredicted RBP3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 SLC25A18Q9H1K4 315 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 PDCL3Q9H2J4 239 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 TTYH1Q9H313 450 aaPredicted RBP3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 TMEM184CQ9NVA4 438 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 HEY2Q9UBP5 337 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 CAMK2AQ9UQM7 478 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 NAALADL1Q9UQQ1 740 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 SQORQ9Y6N5 450 aa3.8□□□□□ -1.8
SNRNP27-204ENST00000487029 ZNF335Q9H4Z2 1342 aaPredicted RBP3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 C17orf113A0A1B0GUU1 675 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 DPPA5A6NC42 116 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 CEP104O60308 925 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 CBX6O95503 412 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 DDX58O95786 925 aaKnown RBP3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 DDAH2O95865 285 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 LCKP06239 509 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 CHMP24386 653 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 MT3P25713 68 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 EPHA8P29322 1005 aaPredicted RBP3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 PTPN9P43378 593 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 CFHR1Q03591 330 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 SRSF1Q07955 248 aaKnown RBP eCLIP3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 STIM1Q13586 685 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 SLC9C1Q4G0N8 1177 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 FBXO43Q4G163 708 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 CCDC30Q5VVM6 783 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 ATG9BQ674R7 924 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 CLEC4GQ6UXB4 293 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 C4orf50Q6ZRC1 276 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 ADGRF4Q8IZF3 695 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 CENPIQ92674 756 aaPredicted RBP3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 KAT2AQ92830 837 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 KIF1BPQ96EK5 621 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 CLMNQ96JQ2 1002 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 SIGLEC11Q96RL6 698 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 MPHOSPH8Q99549 860 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 PIMREGQ9BSJ6 248 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 POT1Q9NUX5 634 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 ZDHHC7Q9NXF8 308 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 TAS2R10Q9NYW0 307 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 GRHL1Q9NZI5 618 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 KCND2Q9NZV8 630 aa3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 ORC3Q9UBD5 711 aaPredicted RBP3.79□□□□□ -1.8
SNRNP27-204ENST00000487029 FBXO40Q9UH90 709 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms