RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CD99L2Q8TCZ2 262 aa18.24■□□□□ 0.51
PDLIM7-207ENST00000486828 NRG4Q8WWG1 115 aa18.24■□□□□ 0.51
PDLIM7-207ENST00000486828 NMUR1Q9HB89 426 aa18.24■□□□□ 0.51
PDLIM7-207ENST00000486828 RBM22Q9NW64 420 aaKnown RBP eCLIP18.24■□□□□ 0.511e-6■□□□□ 9.2
PDLIM7-207ENST00000486828 CPSF2Q9P2I0 782 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-207ENST00000486828 TCAF1Q9Y4C2 921 aa18.24■□□□□ 0.51
PDLIM7-207ENST00000486828 HS3ST4Q9Y661 456 aa18.24■□□□□ 0.51
PDLIM7-207ENST00000486828 A0A1W2PQH9 124 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 LIN7AO14910 233 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 SLC35E2BP0CK96 405 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 ARCN1P48444 511 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 POLD2P49005 469 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 PRKAA2P54646 552 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 TMEM151AQ8N4L1 468 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 TDRD5Q8NAT2 981 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 DTX3LQ8TDB6 740 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 ZNF296Q8WUU4 475 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 SERPINB11Q96P15 392 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 A0A088AWK7 358 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 WASH4PA8MWX3 477 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 PHGDHO43175 533 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 CABYRO75952 493 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 VAPBO95292 243 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 MOCS2O96007 188 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 SBK3P0C264 359 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 OR4Q2P0C623 313 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 COL6A2P12110 1019 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 NCF2P19878 526 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 FLT3LGP49771 235 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 SLC25A3Q00325 362 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 TRIM71Q2Q1W2 868 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 SLC39A12Q504Y0 691 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 FSCBQ5H9T9 825 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 LIPMQ5VYY2 423 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 METTL21CQ5VZV1 264 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 TRIM68Q6AZZ1 485 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 CCSAPQ6IQ19 270 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 ESRP1Q6NXG1 681 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 KIRREL3Q8IZU9 778 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 POU5F2Q8N7G0 328 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 CMTM5Q96DZ9 223 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 FNIP2Q9P278 1114 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 NUDT5Q9UKK9 219 aa18.23■□□□□ 0.51
PDLIM7-207ENST00000486828 NYNRINQ9P2P1 1898 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 TK2O00142 265 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 FKTNO75072 461 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 SAT1P21673 171 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 ARNTP27540 789 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 PRDX6P30041 224 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 ABL2P42684 1182 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 PAPOLAP51003 745 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 PRKCZQ05513 592 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 CACNB2Q08289 660 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 ITGA7Q13683 1181 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 BLMHQ13867 455 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 SLC9B1Q4ZJI4 515 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 C1orf146Q5VVC0 180 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 C14orf80Q86SX3 495 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 MYLK4Q86YV6 388 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 SLC41A1Q8IVJ1 513 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 DENND6AQ8IWF6 608 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 SCN4BQ8IWT1 228 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 STYXQ8WUJ0 223 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 MRGPRX2Q96LB1 330 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 C1orf74Q96LT6 269 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 FSD1LQ9BXM9 530 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 DRC3Q9H069 523 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 ILKAPQ9H0C8 392 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 ZCWPW1Q9H0M4 648 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 GPAMQ9HCL2 828 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 OSER1Q9NX31 292 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 MPP6Q9NZW5 540 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 ANGPTL2Q9UKU9 493 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 RUVBL2Q9Y230 463 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 RAP2CQ9Y3L5 183 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 SQORQ9Y6N5 450 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 MYO16Q9Y6X6 1858 aa18.22■□□□□ 0.51
PDLIM7-207ENST00000486828 B4GALT3O60512 393 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 HK2P52789 917 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 MLLT6P55198 1093 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 MPP1Q00013 466 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 RANBP10Q6VN20 620 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 KCTD4Q8WVF5 259 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 LBHD1Q9BQE6 289 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 UBE2OQ9C0C9 1292 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 TREX1Q9NSU2 369 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 TBC1D13Q9NVG8 400 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 ABI2Q9NYB9 513 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 SCML2Q9UQR0 700 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 NOD1Q9Y239 953 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 FAM95CA0A1B0GW59 222 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 PMPCBO75439 489 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 NEBLO76041 1014 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 DDHD2O94830 711 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 PAMP19021 973 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 CST5P28325 142 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 AVPR1AP37288 418 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 GRIA4P48058 902 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 NUMBP49757 651 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms