RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 SYTL1Q8IYJ3 562 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 CCDC105Q8IYK2 499 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 GALNT15Q8N3T1 639 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 DPP10Q8N608 796 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 C9orf106Q8NAJ2 232 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 SMYD1Q8NB12 490 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 FAM156AQ8NDB6 213 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 TMIEQ8NEW7 156 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 POC1BQ8TC44 478 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 AGR3Q8TD06 166 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 ASB12Q8WXK4 309 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 PIBF1Q8WXW3 757 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 DDB2Q92466 427 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 RPL36ALQ969Q0 106 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 SGK3Q96BR1 496 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 EFHD2Q96C19 240 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 SDCCAG3Q96C92 435 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 C7orf34Q96L11 122 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 FCRL4Q96PJ5 515 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 NTPCRQ9BSD7 190 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 CNPPD1Q9BV87 410 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 ACPTQ9BZG2 426 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 CENPHQ9H3R5 247 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 THAP9Q9H5L6 903 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 STN1Q9H668 368 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 GLRX2Q9NS18 164 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 ZBTB40Q9NUA8 1239 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 ATAD3AQ9NVI7 634 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 GDAP2Q9NXN4 497 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 GGA3Q9NZ52 723 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 CACNG4Q9UBN1 327 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 AMACRQ9UHK6 382 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 RPS6KA6Q9UK32 745 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 PSME2Q9UL46 239 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 ST3GAL5Q9UNP4 418 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 EXOC7Q9UPT5 735 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 PCDHA13Q9Y5I0 950 aa4.36□□□□□ -1.71
R3HDM1-217ENST00000486532 GOLGA6L7A0A1B0GV03 622 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 RGSL1A5PLK6 1076 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 CAPN8A6NHC0 703 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 TARM1B6A8C7 271 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 FZD9O00144 591 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 SCAMP1O15126 338 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 FFAR2O15552 330 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 SMAD6O43541 496 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 RTN3O95197 1032 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 SBK3P0C264 359 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 FTH1P19P0C7X4 201 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 PRR35P0CG20 571 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 NR2F6P10588 404 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 NR2F1P10589 423 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 PRKAR1AP10644 381 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 PORP16435 677 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 PRLRP16471 622 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 ITGALP20701 1170 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 TNFSF4P23510 183 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 ACAT1P24752 427 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 RPL9P32969 192 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 RFC1P35251 1148 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 IARSP41252 1262 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 ALDH9A1P49189 494 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 CASP5P51878 434 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 ALDH18A1P54886 795 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 POLE2P56282 527 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 SLC8A3P57103 927 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 SSTP61278 116 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 IFI35P80217 286 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 SSBP2P81877 361 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 TLE1Q04724 770 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 CHAF1BQ13112 559 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 ACVR2BQ13705 512 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 DOC2AQ14183 400 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 ERV3-1Q14264 604 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 SQLEQ14534 574 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 LASP1Q14847 261 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 ACAP2Q15057 778 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 PCBP2Q15366 365 aaKnown RBP eCLIP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 SMU1Q2TAY7 513 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 LRIT3Q3SXY7 679 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 FBXO43Q4G163 708 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 XKR3Q5GH77 459 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 ATPAF1Q5TC12 328 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 MORN5Q5VZ52 161 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 SLC9A4Q6AI14 798 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 OR7E24Q6IFN5 339 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 NEK5Q6P3R8 708 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 ARHGAP11AQ6P4F7 1023 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 C6orf89Q6UWU4 347 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 CACNA2D4Q7Z3S7 1137 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 TMEM200AQ86VY9 491 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 HEATR4Q86WZ0 1026 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 MICU3Q86XE3 530 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 CEP97Q8IW35 865 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 C12orf56Q8IXR9 622 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 LSMEM2Q8N112 164 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 TCP11L2Q8N4U5 519 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 NIPA2Q8N8Q9 360 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 DNAAF3Q8N9W5 541 aa4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 C1orf162Q8NEQ5 155 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-217ENST00000486532 CEP70Q8NHQ1 597 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms