RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 PCDH20Q8N6Y1 951 aaKnown RBP16.09■□□□□ 0.17
APOE-205ENST00000485628 IL17RCQ8NAC3 791 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 NOA1Q8NC60 698 aaKnown RBP16.09■□□□□ 0.17
APOE-205ENST00000485628 UCMAQ8WVF2 138 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 PTPRN2Q92932 1015 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 CLDN23Q96B33 292 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 UHRF1Q96T88 793 aaPredicted RBP16.09■□□□□ 0.17
APOE-205ENST00000485628 ACOX2Q99424 681 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 KRT12Q99456 494 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 GABRG3Q99928 467 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 CIPCQ9C0C6 399 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 SLC25A13Q9UJS0 675 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 FCF1Q9Y324 198 aaKnown RBP16.09■□□□□ 0.17
APOE-205ENST00000485628 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.08■□□□□ 0.16
APOE-205ENST00000485628 TTC34A8MYJ7 566 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 WASH3PC4AMC7 463 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 ADAM23O75077 832 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 GSRP00390 522 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 MMP2P08253 660 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 ZSCAN5DPP0CG00 497 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 ETS1P14921 441 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 RPL22P35268 128 aaKnown RBP16.08■□□□□ 0.16
APOE-205ENST00000485628 IL12RB1P42701 662 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 SIGLEC14Q08ET2 396 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 NIPAL4Q0D2K0 466 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 SLC14A2Q15849 920 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 HNRNPA1L2Q32P51 320 aaKnown RBP16.08■□□□□ 0.16
APOE-205ENST00000485628 RALGPS1Q5JS13 557 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 C9orf64Q5T6V5 341 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 C22orf39Q6P5X5 142 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 SYDE1Q6ZW31 735 aaPredicted RBP16.08■□□□□ 0.16
APOE-205ENST00000485628 PRUNE1Q86TP1 453 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 ZNF354CQ86Y25 554 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 KLHL7Q8IXQ5 586 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 CCDC105Q8IYK2 499 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 SIX5Q8N196 739 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 ATP11CQ8NB49 1132 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 OR2A12Q8NGT7 310 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 GRK7Q8WTQ7 553 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 SEC14L1Q92503 715 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 FCRL5Q96RD9 977 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 GLOD4Q9HC38 313 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 PCDH9Q9HC56 1237 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 PLA2G4CQ9UP65 541 aa16.08■□□□□ 0.16
APOE-205ENST00000485628 TARSL2A2RTX5 802 aaKnown RBP16.07■□□□□ 0.16
APOE-205ENST00000485628 FAM187AA6NFU0 413 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 CHURC1-FNTBB4DL54 471 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 SGK1O00141 431 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 TP73O15350 636 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 RAD51CO43502 376 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 METTL18O95568 372 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 CES1P23141 567 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 PRKCHP24723 683 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 CAMK2GQ13555 558 aaPredicted RBP16.07■□□□□ 0.16
APOE-205ENST00000485628 PTK6Q13882 451 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 KCTD11Q693B1 232 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 C4orf22Q6V702 233 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 PRPF39Q86UA1 669 aaKnown RBP16.07■□□□□ 0.16
APOE-205ENST00000485628 JAMLQ86YT9 394 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 ZNF513Q8N8E2 541 aaPredicted RBP16.07■□□□□ 0.16
APOE-205ENST00000485628 CCDC26Q8TAB7 109 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 CCDC110Q8TBZ0 833 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 SPOCK2Q92563 424 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 IMP4Q96G21 291 aaKnown RBP16.07■□□□□ 0.16
APOE-205ENST00000485628 NUDCD1Q96RS6 583 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 SLC25A51Q9H1U9 297 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 GBA3Q9H227 469 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 MRPS17Q9Y2R5 130 aaKnown RBP16.07■□□□□ 0.16
APOE-205ENST00000485628 STON1Q9Y6Q2 735 aa16.07■□□□□ 0.16
APOE-205ENST00000485628 ANKRD36A6QL64 1941 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 DCXO43602 365 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 ECEL1O95672 775 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 KRT14P02533 472 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 MAGEA6P43360 314 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 RPS9P46781 194 aaKnown RBP16.06■□□□□ 0.16
APOE-205ENST00000485628 DR1Q01658 176 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 GAS6Q14393 721 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 PARP6Q2NL67 630 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 GLE1Q53GS7 698 aaKnown RBP16.06■□□□□ 0.16
APOE-205ENST00000485628 CARD16Q5EG05 197 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 NCEH1Q6PIU2 408 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 MAMSTRQ6ZN01 415 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 PID1Q7Z2X4 250 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 OR2AP1Q8NGE2 309 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 NSMCE1Q8WV22 266 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 AGAP3Q96P47 875 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 FAM129BQ96TA1 746 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 FERMT1Q9BQL6 677 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 CEP41Q9BYV8 373 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 CPEB1Q9BZB8 566 aaKnown RBP16.06■□□□□ 0.16
APOE-205ENST00000485628 TBC1D17Q9HA65 648 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 NT5MQ9NPB1 228 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 DLGAP2Q9P1A6 1054 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 PAK5Q9P286 719 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 FBXL21Q9UKT6 434 aa16.06■□□□□ 0.16
APOE-205ENST00000485628 EDDM13A0A1B0GTR0 161 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 A0A1W2PQF6 199 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 FAM170BA6NMN3 283 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 TTI1O43156 1089 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 RNF40O75150 1001 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms