RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 IFI44Q8TCB0 444 aa11.03□□□□□ -0.64
CCDC58-205ENST00000479899 MAPK15Q8TD08 544 aa11.03□□□□□ -0.64
CCDC58-205ENST00000479899 ERCC4Q92889 916 aaPredicted RBP11.03□□□□□ -0.64
CCDC58-205ENST00000479899 SNX21Q969T3 373 aa11.03□□□□□ -0.64
CCDC58-205ENST00000479899 FAM131CQ96AQ9 280 aa11.03□□□□□ -0.64
CCDC58-205ENST00000479899 SYNDIG1Q9H7V2 258 aa11.03□□□□□ -0.64
CCDC58-205ENST00000479899 POPDC2Q9HBU9 364 aa11.03□□□□□ -0.64
CCDC58-205ENST00000479899 PREBQ9HCU5 417 aa11.03□□□□□ -0.64
CCDC58-205ENST00000479899 DYRK4Q9NR20 520 aa11.03□□□□□ -0.64
CCDC58-205ENST00000479899 RMND1Q9NWS8 449 aa11.03□□□□□ -0.64
CCDC58-205ENST00000479899 DNAJC28Q9NX36 388 aa11.03□□□□□ -0.64
CCDC58-205ENST00000479899 VANGL2Q9ULK5 521 aa11.03□□□□□ -0.64
CCDC58-205ENST00000479899 SATB2Q9UPW6 733 aa11.03□□□□□ -0.64
CCDC58-205ENST00000479899 FAM237AA0A1B0GTK4 181 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 CAPN8A6NHC0 703 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 PIAS2O75928 621 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 PCDH8O95206 1070 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 AKT2P31751 481 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 GPD2P43304 727 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 ZNF658Q5TYW1 1059 aaPredicted RBP11.02□□□□□ -0.65
CCDC58-205ENST00000479899 TTC39BQ5VTQ0 682 aaPredicted RBP11.02□□□□□ -0.65
CCDC58-205ENST00000479899 KIAA1614Q5VZ46 1190 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 SEL1L3Q68CR1 1132 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 FBXL22Q6P050 247 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 GCNT7Q6ZNI0 430 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 LSMEM2Q8N112 164 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 SLC22A18ASQ8N1D0 253 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 CACTIN-AS1Q8N1I8 211 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 ATP11CQ8NB49 1132 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 TMEM145Q8NBT3 493 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 GRIN3AQ8TCU5 1115 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 ARRDC3Q96B67 414 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 HIC2Q96JB3 615 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 PRMT1Q99873 361 aaKnown RBP11.02□□□□□ -0.65
CCDC58-205ENST00000479899 TRIM62Q9BVG3 475 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 MUC3BQ9H195 1237 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 POLR1BQ9H9Y6 1135 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 THSD1Q9NS62 852 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 KLHL11Q9NVR0 708 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 DDIT4Q9NX09 232 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 SLC12A6Q9UHW9 1150 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 PPM1HQ9ULR3 514 aa11.02□□□□□ -0.65
CCDC58-205ENST00000479899 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.01□□□□□ -0.65
CCDC58-205ENST00000479899 CPED1A4D0V7 1026 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 MCF2LO15068 1137 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 ALOX15BO15296 676 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 THAP12O43422 761 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 SLC28A2O43868 658 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 SNAP91O60641 907 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 GRAP2O75791 330 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 LETM1O95202 739 aaPredicted RBP11.01□□□□□ -0.65
CCDC58-205ENST00000479899 IGLV3-25P01717 112 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 CTSLP07711 333 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 GIMD1P0DJR0 217 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 CKMT1AP12532 417 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 SRCP12931 536 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 HNRNPA2B1P22626 353 aaKnown RBP11.01□□□□□ -0.65
CCDC58-205ENST00000479899 ACADSBP45954 432 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 YWHAZP63104 245 aaKnown RBP11.01□□□□□ -0.65
CCDC58-205ENST00000479899 NME3Q13232 169 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 ZNF177Q13360 481 aaPredicted RBP11.01□□□□□ -0.65
CCDC58-205ENST00000479899 DRAP1Q14919 205 aaPredicted RBP11.01□□□□□ -0.65
CCDC58-205ENST00000479899 TAF5Q15542 800 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 CDKN3Q16667 212 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 CDCP2Q5VXM1 449 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 ISM2Q6H9L7 571 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 HORMAD1Q86X24 394 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 DEFB106AQ8N104 65 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 SH2D3CQ8N5H7 860 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 CCDC34Q96HJ3 373 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 GTPBP4Q9BZE4 634 aaKnown RBP11.01□□□□□ -0.65
CCDC58-205ENST00000479899 ASCL3Q9NQ33 180 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCDC58-205ENST00000479899 NLGN3Q9NZ94 848 aa11.01□□□□□ -0.65
CCDC58-205ENST00000479899 COL27A1Q8IZC6 1860 aaPredicted RBP11□□□□□ -0.65
CCDC58-205ENST00000479899 ARID1BQ8NFD5 2236 aaPredicted RBP11□□□□□ -0.65
CCDC58-205ENST00000479899 LY6G6EA0A0G2JKS1 128 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 A0A1B0GTH6 734 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 A0A1W2PQ27 194 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 A0A1W2PQ64 194 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 PMS2P1A4D2B8 440 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 A6NNZ2 444 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 K7ERQ8 282 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 K7ESM1 405 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 RNF103O00237 685 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 ENDOD1O94919 500 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 RHOCP08134 193 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 C6P13671 934 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 TGM2P21980 687 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 RRM1P23921 792 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 RBMS1P29558 406 aaKnown RBP11□□□□□ -0.65
CCDC58-205ENST00000479899 CCR1P32246 355 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 CHRNA3P32297 505 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 LSSP48449 732 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 DUSP3P51452 185 aaPredicted RBP11□□□□□ -0.65
CCDC58-205ENST00000479899 PLK1P53350 603 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 OXCT1P55809 520 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 ERVPABLB-1P60509 514 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 CDK17Q00537 523 aa11□□□□□ -0.65
CCDC58-205ENST00000479899 LRRC63Q05C16 580 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms