RNA–Protein interactions for RNA: ENST00000479293.5

SFXN5-213, Transcript of sideroflexin 5, humanhuman

TSL 2

Gene SFXN5, Length 1,808 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-213ENST00000479293 SPON2Q9BUD6 331 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 CCDC134Q9H6E4 229 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 SSU72Q9NP77 194 aaKnown RBP25.23■■□□□ 1.63
SFXN5-213ENST00000479293 CHRAC1Q9NRG0 131 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 NKIRAS1Q9NYS0 192 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 ACTL7AQ9Y615 435 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 MAGEB16A2A368 324 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 TTC24A2A3L6 582 aaPredicted RBP25.23■■□□□ 1.63
SFXN5-213ENST00000479293 MUSKO15146 869 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 KDELR3O43731 214 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 LPXNO60711 386 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 TBL1XO60907 577 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 MT-ND3P03897 115 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 GLDCP23378 1020 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 FRG1Q14331 258 aaKnown RBP25.23■■□□□ 1.63
SFXN5-213ENST00000479293 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.23■■□□□ 1.63
SFXN5-213ENST00000479293 TTC16Q8NEE8 873 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 KLF6Q99612 283 aaPredicted RBP25.23■■□□□ 1.63
SFXN5-213ENST00000479293 SLC46A2Q9BY10 475 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 VPS45Q9NRW7 570 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 CFAP97Q9P2B7 532 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 FAM169AQ9Y6X4 670 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 CHD7Q9P2D1 2997 aa25.23■■□□□ 1.63
SFXN5-213ENST00000479293 GMNCA6NCL1 334 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 TRIM49D1C9J1S8 452 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 RB1P06400 928 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 SLC18A1P54219 525 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 OXCT1P55809 520 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 MGAT5Q09328 741 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 ZNF235Q14590 738 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 SMAD1Q15797 465 aaKnown RBP25.22■■□□□ 1.63
SFXN5-213ENST00000479293 ZNF449Q6P9G9 518 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 KDELC2Q7Z4H8 507 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 RASSF3Q86WH2 238 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 HJURPQ8NCD3 748 aaPredicted RBP25.22■■□□□ 1.63
SFXN5-213ENST00000479293 DENND1AQ8TEH3 1009 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 CDKL2Q92772 493 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 KIFC1Q9BW19 673 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 ACE2Q9BYF1 805 aaPredicted RBP25.22■■□□□ 1.63
SFXN5-213ENST00000479293 ATP13A1Q9HD20 1204 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 LSM7Q9UK45 103 aaKnown RBP25.22■■□□□ 1.63
SFXN5-213ENST00000479293 NOTCH4Q99466 2003 aa25.22■■□□□ 1.63
SFXN5-213ENST00000479293 GOLGA8RI6L899 631 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 GJB3O75712 270 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 KRT37O76014 449 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 CA3P07451 260 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 SNRPAP09012 282 aaKnown RBP25.21■■□□□ 1.63
SFXN5-213ENST00000479293 ERVK-10P10266 1014 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 EPCAMP16422 314 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 CHRNA4P43681 627 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 EPHA5P54756 1037 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 NAB1Q13506 487 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 SH2D5Q6ZV89 423 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 CCDC117Q8IWD4 279 aaPredicted RBP25.21■■□□□ 1.63
SFXN5-213ENST00000479293 SHKBP1Q8TBC3 707 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 HMX2A2RU54 273 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 CLASP2O75122 1294 aaKnown RBP25.21■■□□□ 1.63
SFXN5-213ENST00000479293 C1RP00736 705 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 PFKLP17858 780 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 NMBRP28336 390 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 RPA3P35244 121 aaPredicted RBP25.21■■□□□ 1.63
SFXN5-213ENST00000479293 WDR4P57081 412 aaKnown RBP25.21■■□□□ 1.63
SFXN5-213ENST00000479293 BMPR2Q13873 1038 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 RNF219Q5W0B1 726 aaPredicted RBP25.21■■□□□ 1.63
SFXN5-213ENST00000479293 HTR3DQ70Z44 454 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 RTL10Q7L3V2 364 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 SGSM3Q96HU1 749 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 ZNF778Q96MU6 729 aa25.21■■□□□ 1.63
SFXN5-213ENST00000479293 POLR1EQ9GZS1 481 aaKnown RBP25.21■■□□□ 1.63
SFXN5-213ENST00000479293 UBA2Q9UBT2 640 aaPredicted RBP25.21■■□□□ 1.63
SFXN5-213ENST00000479293 CA4P22748 312 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 SERPINB9P50453 376 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 POU6F1Q14863 301 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 FSCBQ5H9T9 825 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 PCID2Q5JVF3 399 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 LGSNQ5TDP6 509 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 CARNMT1Q8N4J0 409 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 BANPQ8N9N5 519 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 GDAP1Q8TB36 358 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 DYDC1Q8WWB3 177 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 TCEAL4Q96EI5 215 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 TMA16Q96EY4 203 aaKnown RBP25.2■■□□□ 1.62
SFXN5-213ENST00000479293 ZNF317Q96PQ6 595 aaPredicted RBP25.2■■□□□ 1.62
SFXN5-213ENST00000479293 CCT8L2Q96SF2 557 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 SEMA3CQ99985 751 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 MUC3BQ9H195 1237 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 ARNT2Q9HBZ2 717 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 DNMT3BQ9UBC3 853 aaKnown RBP25.2■■□□□ 1.62
SFXN5-213ENST00000479293 SH3BP1Q9Y3L3 701 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 PSAT1Q9Y617 370 aa25.2■■□□□ 1.62
SFXN5-213ENST00000479293 KRT38O76015 456 aa25.19■■□□□ 1.62
SFXN5-213ENST00000479293 LUC7L3O95232 432 aaKnown RBP25.19■■□□□ 1.62
SFXN5-213ENST00000479293 GBP2P32456 591 aaPredicted RBP25.19■■□□□ 1.62
SFXN5-213ENST00000479293 ALG1LQ6GMV1 187 aa25.19■■□□□ 1.62
SFXN5-213ENST00000479293 PKN3Q6P5Z2 889 aa25.19■■□□□ 1.62
SFXN5-213ENST00000479293 PACS1Q6VY07 963 aa25.19■■□□□ 1.62
SFXN5-213ENST00000479293 BBS7Q8IWZ6 715 aa25.19■■□□□ 1.62
SFXN5-213ENST00000479293 ALKBH8Q96BT7 664 aaKnown RBP25.19■■□□□ 1.62
SFXN5-213ENST00000479293 SMG9Q9H0W8 520 aaKnown RBP25.19■■□□□ 1.62
SFXN5-213ENST00000479293 NDUFAB1O14561 156 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms