RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PGAP3Q96FM1 320 aaPredicted RBP10.97□□□□□ -0.65
VPS52-217ENST00000478934 NDNQ99608 321 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 IL22Q9GZX6 179 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 PAPOLBQ9NRJ5 636 aaKnown RBP10.97□□□□□ -0.65
VPS52-217ENST00000478934 SLC38A7Q9NVC3 462 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 OSER1Q9NX31 292 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 PADI3Q9ULW8 664 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 PCDHGB4Q9UN71 923 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 ASB3Q9Y575 518 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 PCDHGB5Q9Y5G0 923 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 TRPV2Q9Y5S1 764 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 MYLKQ15746 1914 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 MAGEA13PA6NCF6 341 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 IQCA1LA6NCM1 817 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 STX16-NPEPL1H3BU86 382 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 MAFKO60675 156 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 ALOX15P16050 662 aaPredicted RBP10.96□□□□□ -0.65
VPS52-217ENST00000478934 TCN1P20061 433 aaPredicted RBP10.96□□□□□ -0.65
VPS52-217ENST00000478934 NUDT2P50583 147 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 PKNOX1P55347 436 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 MSLNQ13421 630 aaPredicted RBP10.96□□□□□ -0.65
VPS52-217ENST00000478934 SEPT6Q14141 434 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 IHHQ14623 411 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 TRIP10Q15642 601 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 ZRSR2Q15696 482 aaKnown RBP10.96□□□□□ -0.65
VPS52-217ENST00000478934 LSM12Q3MHD2 195 aaKnown RBP10.96□□□□□ -0.65
VPS52-217ENST00000478934 ITPRIPL1Q6GPH6 555 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 TFAP2DQ7Z6R9 452 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 DHDDSQ86SQ9 333 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 LDB1Q86U70 411 aaPredicted RBP10.96□□□□□ -0.65
VPS52-217ENST00000478934 LSMEM2Q8N112 164 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 TMEM86AQ8N2M4 240 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 CCNYL1Q8N7R7 359 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 GDPD5Q8WTR4 605 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 FCRL2Q96LA5 508 aaPredicted RBP10.96□□□□□ -0.65
VPS52-217ENST00000478934 ARHGAP39Q9C0H5 1083 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 SENP6Q9GZR1 1112 aaPredicted RBP10.96□□□□□ -0.65
VPS52-217ENST00000478934 C1orf21Q9H246 121 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 CSNK1G1Q9HCP0 422 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 TRHDEQ9UKU6 1024 aa10.96□□□□□ -0.65
VPS52-217ENST00000478934 M0QZ92 97 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 NCAM2O15394 837 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 GRID2O43424 1007 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 DLX3O60479 287 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 MPOP05164 745 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 NPY2RP49146 381 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 HUNKP57058 714 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 PDCD2Q16342 344 aaPredicted RBP10.96□□□□□ -0.66
VPS52-217ENST00000478934 GPR162Q16538 588 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 GRAMD1BQ3KR37 738 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 INTS6LQ5JSJ4 861 aaKnown RBP10.96□□□□□ -0.66
VPS52-217ENST00000478934 TSTD2Q5T7W7 516 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 NXNQ6DKJ4 435 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 FAM171BQ6P995 826 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 DCLRE1AQ6PJP8 1040 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 PAXIP1Q6ZW49 1069 aaPredicted RBP10.96□□□□□ -0.66
VPS52-217ENST00000478934 SCD5Q86SK9 330 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 SCN4BQ8IWT1 228 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 ATPAF2Q8N5M1 289 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 FAM156AQ8NDB6 213 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 IFT43Q96FT9 208 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 CATSPER2Q96P56 530 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 KLHL5Q96PQ7 755 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 GCNAQ96QF7 691 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 TBL1YQ9BQ87 522 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 TRPV6Q9H1D0 765 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 TCF7L2Q9NQB0 619 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 SPATS2LQ9NUQ6 558 aaKnown RBP10.96□□□□□ -0.66
VPS52-217ENST00000478934 XPR1Q9UBH6 696 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 TLK1Q9UKI8 766 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 ADAM28Q9UKQ2 775 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 SSX2IPQ9Y2D8 614 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 PTCH2Q9Y6C5 1203 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 TLL2Q9Y6L7 1015 aa10.96□□□□□ -0.66
VPS52-217ENST00000478934 F9P00740 461 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 HNRNPLP14866 589 aaKnown RBP eCLIP10.95□□□□□ -0.66
VPS52-217ENST00000478934 TFEBP19484 476 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 CRABP2P29373 138 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 GRIK1P39086 918 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 SLC1A2P43004 574 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 SLC5A3P53794 718 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 TBCCQ15814 346 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 RBM20Q5T481 1227 aaKnown RBP10.95□□□□□ -0.66
VPS52-217ENST00000478934 PKN3Q6P5Z2 889 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 PGM2L1Q6PCE3 622 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 CNSTQ6PJW8 725 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 SNX32Q86XE0 403 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 GPR22Q99680 433 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 KIFC1Q9BW19 673 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 RRAGCQ9HB90 399 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 GLOD4Q9HC38 313 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 CYP4F12Q9HCS2 524 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 TNFRSF12AQ9NP84 129 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 RBM22Q9NW64 420 aaKnown RBP eCLIP10.95□□□□□ -0.66
VPS52-217ENST00000478934 CAPN8A6NHC0 703 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 TIMM44O43615 452 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 SOAT2O75908 522 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 TBX18O95935 607 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 PCSK1P29120 753 aa10.95□□□□□ -0.66
VPS52-217ENST00000478934 ARCN1P48444 511 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms