RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 ARHGAP12Q8IWW6 846 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 NPWQ8N729 165 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 TMIEQ8NEW7 156 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 OR2T34Q8NGX1 318 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 OR6K2Q8NGY2 324 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 C1orf216Q8TAB5 229 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 SLC35G2Q8TBE7 412 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 FAM131CQ96AQ9 280 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 ARRDC3Q96B67 414 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 CSPG4P5Q96PW8 444 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 HEPHQ9BQS7 1158 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 ETNK2Q9NVF9 386 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 HECAQ9UBI9 543 aaPredicted RBP15.87■□□□□ 0.13
HMGA1-206ENST00000478214 MFHAS1Q9Y4C4 1052 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 WASF2Q9Y6W5 498 aa15.87■□□□□ 0.13
HMGA1-206ENST00000478214 CHD5Q8TDI0 1954 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 A0A1B0GTW7 788 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 ARHGAP42A6NI28 874 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 J3KR12 359 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 CDX4O14627 284 aaPredicted RBP15.86■□□□□ 0.13
HMGA1-206ENST00000478214 ENGP17813 658 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 GKP32189 559 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 MAPK8P45983 427 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 LIMK1P53667 647 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 TAS2R40P59535 323 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 MESDQ14696 234 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 HADHQ16836 314 aaKnown RBP15.86■□□□□ 0.13
HMGA1-206ENST00000478214 ATXN7L2Q5T6C5 722 aaPredicted RBP15.86■□□□□ 0.13
HMGA1-206ENST00000478214 AGBL4Q5VU57 503 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 AFMIDQ63HM1 303 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 TP53INP2Q8IXH6 220 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 PLPP6Q8IY26 295 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 RYBPQ8N488 228 aaPredicted RBP15.86■□□□□ 0.13
HMGA1-206ENST00000478214 OR2AP1Q8NGE2 309 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 TSC1Q92574 1164 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 ORAI3Q9BRQ5 295 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 CEP192Q8TEP8 1941 aa15.86■□□□□ 0.13
HMGA1-206ENST00000478214 TBC1D3DA0A087WVF3 549 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 TBC1D3IA0A087WXS9 549 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 TBC1D3EA0A087X179 549 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 TBC1D3KA0A087X1G2 549 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 DCDC2BA2VCK2 349 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 TBC1D3FA6NER0 549 aaPredicted RBP15.85■□□□□ 0.13
HMGA1-206ENST00000478214 C4orf47A7E2U8 309 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 C10orf142B7Z368 130 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 TBC1D3LB9A6J9 549 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 DFFAO00273 331 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 BCAT2O15382 392 aaPredicted RBP15.85■□□□□ 0.13
HMGA1-206ENST00000478214 SLC7A4O43246 635 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 PRAMEF11O60813 436 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 GSRP00390 522 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 CD48P09326 243 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 TBC1D3HP0C7X1 549 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 CD27P26842 260 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 CDH6P55285 790 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 SNRPD1P62314 119 aaKnown RBP15.85■□□□□ 0.13
HMGA1-206ENST00000478214 MMRN1Q13201 1228 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 KRT81Q14533 505 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 CYTH1Q15438 398 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 INO80DQ53TQ3 878 aaPredicted RBP15.85■□□□□ 0.13
HMGA1-206ENST00000478214 PIP5KL1Q5T9C9 394 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 TBC1D3GQ6DHY5 549 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 TBC1D3CQ6IPX1 549 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 ARHGAP36Q6ZRI8 547 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 RHOT2Q8IXI1 618 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 TBC1D3Q8IZP1 549 aaPredicted RBP15.85■□□□□ 0.13
HMGA1-206ENST00000478214 CASKIN2Q8WXE0 1202 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 RFFLQ8WZ73 363 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 VOPP1Q96AW1 172 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 PANX2Q96RD6 677 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 RTKNQ9BST9 563 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 GTPBP2Q9BX10 602 aaKnown RBP15.85■□□□□ 0.13
HMGA1-206ENST00000478214 ZDHHC6Q9H6R6 413 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 EBF2Q9HAK2 575 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 PDFQ9HBH1 243 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 TMEM9BQ9NQ34 198 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 DYRK4Q9NR20 520 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 UBA2Q9UBT2 640 aaPredicted RBP15.85■□□□□ 0.13
HMGA1-206ENST00000478214 INTUQ9ULD6 942 aa15.85■□□□□ 0.13
HMGA1-206ENST00000478214 NYNRINQ9P2P1 1898 aaKnown RBP15.84■□□□□ 0.13
HMGA1-206ENST00000478214 KRIT1O00522 736 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 ARHGAP33O14559 1287 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 PLRG1O43660 514 aaKnown RBP15.84■□□□□ 0.13
HMGA1-206ENST00000478214 MTA2O94776 668 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 IL4RP24394 825 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 MAN1A1P33908 653 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 PI4KAP42356 2102 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 MAGEA1P43355 309 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 CCR5P51681 352 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 ARSEP51690 589 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 TAS2R38P59533 333 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 RHOAP61586 193 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 PPP2CBP62714 309 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 PPP2CAP67775 309 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 MYLK3Q32MK0 819 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 LZTR1Q8N653 840 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 OR2I1PQ8NGU4 316 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 FAM71BQ8TC56 605 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 TM9SF3Q9HD45 589 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 KLHL11Q9NVR0 708 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms