RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 CCDC15Q0P6D6 951 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 MAPK8IP2Q13387 824 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-223ENST00000475146 KCNT1Q5JUK3 1230 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 SARM1Q6SZW1 724 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 LAYNQ6UX15 382 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 ADAT2Q7Z6V5 191 aaKnown RBP24.46■■□□□ 1.51
CPNE1-223ENST00000475146 HSPH1Q92598 858 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 PPP1R16AQ96I34 528 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 CELF6Q96J87 481 aaKnown RBP24.46■■□□□ 1.51
CPNE1-223ENST00000475146 ORAI3Q9BRQ5 295 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 KLC2Q9H0B6 622 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 KDM4CQ9H3R0 1056 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 ZDHHC6Q9H6R6 413 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 OSGEPQ9NPF4 335 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 HECAQ9UBI9 543 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-223ENST00000475146 WASF2Q9Y6W5 498 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 MYO1FO00160 1098 aa24.45■■□□□ 1.5
CPNE1-223ENST00000475146 RNF103O00237 685 aa24.45■■□□□ 1.5
CPNE1-223ENST00000475146 TMCC1O94876 653 aa24.45■■□□□ 1.5
CPNE1-223ENST00000475146 TCF4P15884 667 aa24.45■■□□□ 1.5
CPNE1-223ENST00000475146 SSR1P43307 286 aaKnown RBP24.45■■□□□ 1.5
CPNE1-223ENST00000475146 GRIA4P48058 902 aa24.45■■□□□ 1.5
CPNE1-223ENST00000475146 NOVA1P51513 510 aaKnown RBP24.45■■□□□ 1.5
CPNE1-223ENST00000475146 ZNF135P52742 658 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-223ENST00000475146 SNRPD1P62314 119 aaKnown RBP24.45■■□□□ 1.5
CPNE1-223ENST00000475146 SERINC3Q13530 473 aa24.45■■□□□ 1.5
CPNE1-223ENST00000475146 PIP5KL1Q5T9C9 394 aa24.45■■□□□ 1.5
CPNE1-223ENST00000475146 NIPA2Q8N8Q9 360 aa24.45■■□□□ 1.5
CPNE1-223ENST00000475146 OR6K2Q8NGY2 324 aa24.45■■□□□ 1.5
CPNE1-223ENST00000475146 ZNF564Q8TBZ8 553 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-223ENST00000475146 CTNNBL1Q8WYA6 563 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-223ENST00000475146 SLC6A18Q96N87 628 aa24.45■■□□□ 1.5
CPNE1-223ENST00000475146 CTTNBP2NLQ9P2B4 639 aa24.45■■□□□ 1.5
CPNE1-223ENST00000475146 TPX2Q9ULW0 747 aaKnown RBP24.45■■□□□ 1.5
CPNE1-223ENST00000475146 CACNA1EQ15878 2313 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 H3BRJ5 948 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 ERCC2P18074 760 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 NDST2P52849 883 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 RACK1P63244 317 aaKnown RBP24.44■■□□□ 1.5
CPNE1-223ENST00000475146 BOLA3Q53S33 107 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 PSAPL1Q6NUJ1 521 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 IL27RAQ6UWB1 636 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 ERN2Q76MJ5 926 aaKnown RBP24.44■■□□□ 1.5
CPNE1-223ENST00000475146 CNGA4Q8IV77 575 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 OR2AP1Q8NGE2 309 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 CASKIN2Q8WXE0 1202 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 CHP1Q99653 195 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 PACSIN1Q9BY11 444 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 LRRC19Q9H756 370 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 EBF2Q9HAK2 575 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 AASDHPPTQ9NRN7 309 aa24.44■■□□□ 1.5
CPNE1-223ENST00000475146 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.44■■□□□ 1.5
CPNE1-223ENST00000475146 DNAAF2Q9NVR5 837 aaKnown RBP24.44■■□□□ 1.5
CPNE1-223ENST00000475146 CWC15Q9P013 229 aaKnown RBP24.44■■□□□ 1.5
CPNE1-223ENST00000475146 ARHGAP42A6NI28 874 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 AKR1B15C9JRZ8 316 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-223ENST00000475146 KRIT1O00522 736 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 KCNK5O95279 499 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 CER1O95813 267 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 GSRP00390 522 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 H2AFZP0C0S5 128 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 MAT2AP31153 395 aaKnown RBP24.43■■□□□ 1.5
CPNE1-223ENST00000475146 ARL4AP40617 200 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 RHOAP61586 193 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 BNC1Q01954 994 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 ASTE1Q2TB18 679 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-223ENST00000475146 ATXN7L2Q5T6C5 722 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-223ENST00000475146 H2AFVQ71UI9 128 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 PRPF39Q86UA1 669 aaKnown RBP24.43■■□□□ 1.5
CPNE1-223ENST00000475146 PLPP6Q8IY26 295 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 NETO2Q8NC67 525 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 SERAC1Q96JX3 654 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 CCDC42Q96M95 316 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 GDAP1L1Q96MZ0 367 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 SLC39A8Q9C0K1 460 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 GAREM1Q9H706 876 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 PREBQ9HCU5 417 aa24.43■■□□□ 1.5
CPNE1-223ENST00000475146 UBA2Q9UBT2 640 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-223ENST00000475146 ASCC3Q8N3C0 2202 aaKnown RBP24.42■■□□□ 1.5
CPNE1-223ENST00000475146 RARAP10276 462 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 ITGB7P26010 798 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 GKP32189 559 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 NEK3P51956 506 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 C21orf59P57076 290 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 TAS2R38P59533 333 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 DPYSL2Q16555 572 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 KIF19Q2TAC6 998 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 DEFB124Q8NES8 71 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 HDAC8Q9BY41 377 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 SPTLC3Q9NUV7 552 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 UVRAGQ9P2Y5 699 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 ANKRD6Q9Y2G4 727 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 PLXNA2O75051 1894 aa24.42■■□□□ 1.5
CPNE1-223ENST00000475146 CACNA1AO00555 2505 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 C10orf142B7Z368 130 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 DFFAO00273 331 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 LATO43561 262 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 RNGTTO60942 597 aaKnown RBP24.41■■□□□ 1.5
CPNE1-223ENST00000475146 IGSF6O95976 241 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 CSRP1P21291 193 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms