RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 KDM4CQ9H3R0 1056 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 CBX8Q9HC52 389 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 PARVAQ9NVD7 372 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 TMEM248Q9NWD8 314 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 IL36AQ9UHA7 158 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 TPX2Q9ULW0 747 aaKnown RBP9.62□□□□□ -0.87
PDPN-204ENST00000475043 FCF1Q9Y324 198 aaKnown RBP9.62□□□□□ -0.87
PDPN-204ENST00000475043 ACTL7AQ9Y615 435 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 H0Y8X5 98 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 WNT9AO14904 365 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 FLRT2O43155 660 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 HYAL3O43820 417 aaPredicted RBP9.61□□□□□ -0.87
PDPN-204ENST00000475043 RAMP2O60895 175 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 RNGTTO60942 597 aaKnown RBP9.61□□□□□ -0.87
PDPN-204ENST00000475043 LEFTY1O75610 366 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 ZMPSTE24O75844 475 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 FTLP02792 175 aaPredicted RBP9.61□□□□□ -0.87
PDPN-204ENST00000475043 WNT1P04628 370 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 SKILP12757 684 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 PSMA2P25787 234 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 L1CAMP32004 1257 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 CTSKP43235 329 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 CCT8P50990 548 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 GEMIN4P57678 1058 aaKnown RBP9.61□□□□□ -0.87
PDPN-204ENST00000475043 FANCCQ00597 558 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 SLC20A2Q08357 652 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 SCAPQ12770 1279 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 MAMLD1Q13495 774 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 POLD3Q15054 466 aaPredicted RBP9.61□□□□□ -0.87
PDPN-204ENST00000475043 CARD16Q5EG05 197 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 PRAMEF14Q5SWL7 426 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 LEKR1Q6ZMV7 388 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 DPY19L3Q6ZPD9 716 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 ZNF571Q7Z3V5 609 aaPredicted RBP9.61□□□□□ -0.87
PDPN-204ENST00000475043 TMC6Q7Z403 805 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 NLRP14Q86W24 1093 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 DNAAF5Q86Y56 855 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 PCDH20Q8N6Y1 951 aaKnown RBP9.61□□□□□ -0.87
PDPN-204ENST00000475043 TMIEQ8NEW7 156 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 ARHGEF2Q92974 986 aaKnown RBP9.61□□□□□ -0.87
PDPN-204ENST00000475043 ARRDC3Q96B67 414 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 PPP1R16AQ96I34 528 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 VCPIP1Q96JH7 1222 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 SYT11Q9BT88 431 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 TM6SF2Q9BZW4 377 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 CEP44Q9C0F1 390 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 MAGEH1Q9H213 219 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 RETREG1Q9H6L5 497 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 ZDHHC6Q9H6R6 413 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 PREBQ9HCU5 417 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 AIPL1Q9NZN9 384 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 PCOLCE2Q9UKZ9 415 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 FZD10Q9ULW2 581 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 CHD5Q8TDI0 1954 aa9.61□□□□□ -0.87
PDPN-204ENST00000475043 CACNA1EQ15878 2313 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 RNF103O00237 685 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 LCE2BO14633 110 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 LATO43561 262 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 BUB1O43683 1085 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 DFNA5O60443 496 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 ZNF821O75541 412 aaPredicted RBP9.6□□□□□ -0.87
PDPN-204ENST00000475043 RNF8O76064 485 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 PCDH8O95206 1070 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 TRIM16O95361 564 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 FTH1P19P0C7X4 201 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 PTMSP20962 102 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 CCNHP51946 323 aaPredicted RBP9.6□□□□□ -0.87
PDPN-204ENST00000475043 AIF1P55008 147 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 UBASH3AP57075 661 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 TAS2R38P59533 333 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 OGDHQ02218 1023 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 STAT4Q14765 748 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 ZNF423Q2M1K9 1284 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 SETMARQ53H47 684 aaPredicted RBP9.6□□□□□ -0.87
PDPN-204ENST00000475043 TDRD12Q587J7 1177 aaKnown RBP9.6□□□□□ -0.87
PDPN-204ENST00000475043 PIP5KL1Q5T9C9 394 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 E4F1Q66K89 784 aaPredicted RBP9.6□□□□□ -0.87
PDPN-204ENST00000475043 NAPEPLDQ6IQ20 393 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 FBXL19Q6PCT2 694 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 ERN2Q76MJ5 926 aaKnown RBP9.6□□□□□ -0.87
PDPN-204ENST00000475043 TRIM69Q86WT6 500 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 CHCHD4Q8N4Q1 142 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 RTL3Q8N8U3 475 aaKnown RBP9.6□□□□□ -0.87
PDPN-204ENST00000475043 PNPLA1Q8N8W4 532 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 OR6K2Q8NGY2 324 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 CPLX3Q8WVH0 158 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 KLK6Q92876 244 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 FAM131CQ96AQ9 280 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 ZNF653Q96CK0 615 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 MYOCQ99972 504 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 HEPHQ9BQS7 1158 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.6□□□□□ -0.87
PDPN-204ENST00000475043 EDEM3Q9BZQ6 932 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 CATSPERBQ9H7T0 1116 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 GDF3Q9NR23 364 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 ARHGAP20Q9P2F6 1191 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 MYO1AQ9UBC5 1043 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 CNOT8Q9UFF9 292 aaKnown RBP9.6□□□□□ -0.87
PDPN-204ENST00000475043 PCSK1NQ9UHG2 260 aa9.6□□□□□ -0.87
PDPN-204ENST00000475043 AP4E1Q9UPM8 1137 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms