RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 VAMP2P63027 116 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 CRYZQ08257 329 aaKnown RBP3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 TRPC3Q13507 836 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 INTS11Q5TA45 600 aaKnown RBP3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 PARM1Q6UWI2 310 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 LRIG3Q6UXM1 1119 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 SLC16A12Q6ZSM3 486 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 RNF144BQ7Z419 303 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 VPS52Q8N1B4 723 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 OR52N4Q8NGI2 321 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 PHF21BQ96EK2 531 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 MASTLQ96GX5 879 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 PHF7Q9BWX1 381 aaPredicted RBP3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 STN1Q9H668 368 aaKnown RBP3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 C6orf106Q9H6K1 298 aaPredicted RBP3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 PLAC1Q9HBJ0 212 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 THAP1Q9NVV9 213 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 KLQ9UEF7 1012 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 HSF4Q9ULV5 492 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 GDAQ9Y2T3 454 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 PRSS47A8MTI9 375 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 MCIDASD6RGH6 385 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 RGS14O43566 566 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 DHX16O60231 1041 aaKnown RBP3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 TSPAN3O60637 253 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 SGPL1O95470 568 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 CYP1A2P05177 515 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 HNRNPA1P09651 372 aaKnown RBP eCLIP3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 PKMP14618 531 aaKnown RBP3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 KCNJ4P48050 445 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 CLCN5P51795 746 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 MVDP53602 400 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 ADPRHP54922 357 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 ABATP80404 500 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 ZBTB16Q05516 673 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 GPS2Q13227 327 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 ALKBH1Q13686 389 aaKnown RBP3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 RUNDC3AQ59EK9 446 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 ARL13AQ5H913 290 aaPredicted RBP3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 FAM76BQ5HYJ3 339 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 DENND1BQ6P3S1 775 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 MTFR2Q6P444 385 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 TMEM200AQ86VY9 491 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 PAQR4Q8N4S7 273 aaPredicted RBP3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 PAF1Q8N7H5 531 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 ANKRD44Q8N8A2 993 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 FAM47BQ8NA70 645 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 NAXEQ8NCW5 288 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 FAM110DQ8TAY7 271 aaPredicted RBP3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 C2CD4CQ8TF44 421 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 STAMQ92783 540 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 RNFT2Q96EX2 444 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 PPM1MQ96MI6 270 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 NAP1L4Q99733 375 aaKnown RBP3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 TM6SF1Q9BZW5 370 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 TRIM31Q9BZY9 425 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 DCLK3Q9C098 648 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 CTDSP1Q9GZU7 261 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 TASP1Q9H6P5 420 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 ACAD9Q9H845 621 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 IL21RQ9HBE5 538 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 ERVK-5Q9HDB9 667 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 UBN1Q9NPG3 1134 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 TBC1D14Q9P2M4 693 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 ZNF69Q9UC07 566 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 CD207Q9UJ71 328 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 FBXO4Q9UKT5 387 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 LMTK3Q96Q04 1460 aa3.86□□□□□ -1.79
TMEM50B-208ENST00000474272 CXorf65A6NEN9 183 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 FAM90A7PA6NKC0 464 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 OR6C75A6NL08 312 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 A6NLC8 198 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 FAM90A22PA8MWA6 464 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 FAM90A12PA8MX19 464 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 FAM90A23PA8MXZ1 464 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 FOXO6A8MYZ6 492 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 SYN3O14994 580 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 SH3BP5O60239 455 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 METTL18O95568 372 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 CD53P19397 219 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 TYK2P29597 1187 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 ROR2Q01974 943 aaKnown RBP3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 Q0VFX4 171 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 GPR18Q14330 331 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 WDR45BQ5MNZ6 344 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 Q5PR19 223 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 RETSATQ6NUM9 610 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 SLC30A9Q6PML9 568 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.85□□□□□ -1.797e-6■□□□□ 10.6
TMEM50B-208ENST00000474272 GALNT7Q86SF2 657 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 LSM14AQ8ND56 463 aaKnown RBP3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 ADAMTS14Q8WXS8 1223 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 IP6K1Q92551 441 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 ZNF419Q96HQ0 510 aaPredicted RBP3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 ADAD1Q96M93 576 aaKnown RBP3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 AGXT2Q9BYV1 514 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 FRMD8Q9BZ67 464 aaPredicted RBP3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 CDT1Q9H211 546 aa3.85□□□□□ -1.79
TMEM50B-208ENST00000474272 MROH8Q9H579 483 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms