RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 SLC41A1Q8IVJ1 513 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 DSELQ8IZU8 1212 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 MS4A4AQ96JQ5 239 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 CATSPER2Q96P56 530 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 GPR78Q96P69 363 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 GCNAQ96QF7 691 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 OMDQ99983 421 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 FERMT1Q9BQL6 677 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 ILKAPQ9H0C8 392 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-214ENST00000473778 PRDM16Q9HAZ2 1276 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 SLC2A6Q9UGQ3 507 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 HTTP42858 3142 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 RRN3P2A6NIE6 340 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 C9IYK1 514 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 HDAC3O15379 428 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 TIMM44O43615 452 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 DLX3O60479 287 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 ETS2P15036 469 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 PRDX6P30041 224 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 RPL14P50914 215 aaKnown RBP11.11□□□□□ -0.63
C9orf3-214ENST00000473778 GJA9P57773 515 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 CEACAM7Q14002 265 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 GK3PQ14409 553 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 GRM2Q14416 872 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 GRB14Q14449 540 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 ZNF423Q2M1K9 1284 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 PIGGQ5H8A4 983 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 OGFRL1Q5TC84 451 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-214ENST00000473778 LIPMQ5VYY2 423 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 METTL21CQ5VZV1 264 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 LILRA2Q8N149 483 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 USP13Q92995 863 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-214ENST00000473778 RCN3Q96D15 328 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 CNDP1Q96KN2 507 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 GBP5Q96PP8 586 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 SPATA16Q9BXB7 569 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 IL22Q9GZX6 179 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 ABHD16BQ9H3Z7 469 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 TNFRSF12AQ9NP84 129 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 NDFIP2Q9NV92 336 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 XPR1Q9UBH6 696 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 RAP2CQ9Y3L5 183 aa11.11□□□□□ -0.63
C9orf3-214ENST00000473778 COL4A4P53420 1690 aaPredicted RBP11.1□□□□□ -0.63
C9orf3-214ENST00000473778 OR6B1O95007 311 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 PIM1P11309 404 aaPredicted RBP11.1□□□□□ -0.63
C9orf3-214ENST00000473778 LRPAP1P30533 357 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 GSTT1P30711 240 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 PGFP49763 221 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 CLCNKBP51801 687 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 CSE1LP55060 971 aaKnown RBP11.1□□□□□ -0.63
C9orf3-214ENST00000473778 MRPS22P82650 360 aaKnown RBP11.1□□□□□ -0.63
C9orf3-214ENST00000473778 MED21Q13503 144 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 USP10Q14694 798 aaKnown RBP11.1□□□□□ -0.63
C9orf3-214ENST00000473778 POU6F1Q14863 301 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 ANO4Q32M45 955 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 LIN52Q52LA3 116 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 FSCBQ5H9T9 825 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 LDLRAD1Q5T700 205 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 SEL1L3Q68CR1 1132 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 DENND5AQ6IQ26 1287 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 UGT2A3Q6UWM9 527 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 RPS27LQ71UM5 84 aaKnown RBP11.1□□□□□ -0.63
C9orf3-214ENST00000473778 TMC7Q7Z402 723 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 FAM156AQ8NDB6 213 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 STYXQ8WUJ0 223 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 PGAP3Q96FM1 320 aaPredicted RBP11.1□□□□□ -0.63
C9orf3-214ENST00000473778 SENP8Q96LD8 212 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 CDRT15Q96T59 188 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 KIFC1Q9BW19 673 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 MIOSQ9NXC5 875 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 UBAP1Q9NZ09 502 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 RNF181Q9P0P0 153 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 STK39Q9UEW8 545 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 GNEQ9Y223 722 aaKnown RBP11.1□□□□□ -0.63
C9orf3-214ENST00000473778 RUVBL2Q9Y230 463 aaKnown RBP11.1□□□□□ -0.63
C9orf3-214ENST00000473778 NEMP2A6NFY4 417 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 C19orf67A6NJJ6 358 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 SPATA31D3P0C874 917 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 ARCN1P48444 511 aaKnown RBP11.1□□□□□ -0.63
C9orf3-214ENST00000473778 HCAR3P49019 387 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 FOLH1Q04609 750 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 GRAMD1BQ3KR37 738 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 ESRP1Q6NXG1 681 aaKnown RBP11.1□□□□□ -0.63
C9orf3-214ENST00000473778 SPATA31D4Q6ZUB0 917 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 TAC4Q86UU9 113 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 PQLC1Q8N2U9 271 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 NXNL1Q96CM4 212 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 RHOJQ9H4E5 214 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 WDCPQ9H6R7 721 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 ZNF232Q9UNY5 417 aa11.1□□□□□ -0.63
C9orf3-214ENST00000473778 MTF2Q9Y483 593 aaPredicted RBP11.1□□□□□ -0.63
C9orf3-214ENST00000473778 SCN4AP35499 1836 aa11.09□□□□□ -0.63
C9orf3-214ENST00000473778 MYOCOSA0A1B0GUC4 107 aa11.09□□□□□ -0.63
C9orf3-214ENST00000473778 RGSL1A5PLK6 1076 aa11.09□□□□□ -0.63
C9orf3-214ENST00000473778 ERI2A8K979 691 aaKnown RBP11.09□□□□□ -0.63
C9orf3-214ENST00000473778 NCAM2O15394 837 aa11.09□□□□□ -0.63
C9orf3-214ENST00000473778 STRNO43815 780 aa11.09□□□□□ -0.63
C9orf3-214ENST00000473778 VAPBO95292 243 aa11.09□□□□□ -0.63
C9orf3-214ENST00000473778 SMIM18P0DKX4 95 aa11.09□□□□□ -0.63
C9orf3-214ENST00000473778 SRGAP2BP0DMP2 458 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms