RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PARP15Q460N3 678 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 ANKRD20A8PQ5CZ79 823 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 FAM182AQ5T1J6 154 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 NCBP2-AS2Q69YL0 99 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 DPY19L3Q6ZPD9 716 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 SLC41A1Q8IVJ1 513 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 TMEFF1Q8IYR6 380 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 LRRC57Q8N9N7 239 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 LRRN4Q8WUT4 740 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 PRCCQ92733 491 aaPredicted RBP13.36□□□□□ -0.27
TPM3-216ENST00000473036 KRT35Q92764 455 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 TOE1Q96GM8 510 aaKnown RBP13.36□□□□□ -0.27
TPM3-216ENST00000473036 ZNF419Q96HQ0 510 aaPredicted RBP13.36□□□□□ -0.27
TPM3-216ENST00000473036 TSGA10Q9BZW7 698 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 PABPC3Q9H361 631 aaKnown RBP13.36□□□□□ -0.27
TPM3-216ENST00000473036 WSB2Q9NYS7 404 aaPredicted RBP13.36□□□□□ -0.27
TPM3-216ENST00000473036 PPM1HQ9ULR3 514 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 ADGRG1Q9Y653 693 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 ANKRD11Q6UB99 2663 aaPredicted RBP13.36□□□□□ -0.27
TPM3-216ENST00000473036 GRID2IPA4D2P6 1211 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 MCF2LO15068 1137 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 INSIG1O15503 277 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 DAPK3O43293 454 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 MFSD11O43934 449 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 BNIP3LO60238 219 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 PRAMEF11O60813 436 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 GJB3O75712 270 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 TMCC1O94876 653 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 MAP3K6O95382 1288 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 KRT7P08729 469 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 TNNT1P13805 278 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 ACSL1P33121 698 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 PSMD8P48556 350 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 CLCN6P51797 869 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 ZNF135P52742 658 aaPredicted RBP13.35□□□□□ -0.27
TPM3-216ENST00000473036 ADCY2Q08462 1091 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 KRT81Q14533 505 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 ELAVL3Q14576 367 aaKnown RBP13.35□□□□□ -0.27
TPM3-216ENST00000473036 TAZQ16635 292 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 IFI16Q16666 785 aaKnown RBP13.35□□□□□ -0.27
TPM3-216ENST00000473036 POM121L1PQ3SYA9 428 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 ATXN7L2Q5T6C5 722 aaPredicted RBP13.35□□□□□ -0.27
TPM3-216ENST00000473036 ZNF776Q68DI1 518 aaPredicted RBP13.35□□□□□ -0.27
TPM3-216ENST00000473036 RETSATQ6NUM9 610 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 UNQ6494/PRO21346Q6UXR6 183 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 FAM124AQ86V42 546 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 KCTD6Q8NC69 237 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 OR6K2Q8NGY2 324 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 FAM131CQ96AQ9 280 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 RCOR3Q9P2K3 495 aaPredicted RBP13.35□□□□□ -0.27
TPM3-216ENST00000473036 LHX3Q9UBR4 397 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 SLCO1B1Q9Y6L6 691 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 WASF2Q9Y6W5 498 aa13.35□□□□□ -0.27
TPM3-216ENST00000473036 CXorf51AA0A1B0GTR3 108 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 A0A1W2PP55 124 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 DFFAO00273 331 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 MUSKO15146 869 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 ZNF217O75362 1048 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 CD6P30203 668 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 SLC8A1P32418 973 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 DEKP35659 375 aaKnown RBP13.34□□□□□ -0.27
TPM3-216ENST00000473036 ETFBP38117 255 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 NNMTP40261 264 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 ARL4AP40617 200 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 SLC1A1P43005 524 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 RGRP47804 291 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 GBE1Q04446 702 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 SLC20A2Q08357 652 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 KIF5AQ12840 1032 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 PDK2Q15119 407 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 CCDC6Q16204 474 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 LRRC38Q5VT99 294 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 C11orf63Q6NUN7 778 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 MFSD7Q6UXD7 560 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 ZNF662Q6ZS27 426 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 ARMCX6Q7L4S7 300 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 ISG20Q96AZ6 181 aaKnown RBP13.34□□□□□ -0.27
TPM3-216ENST00000473036 ARRDC3Q96B67 414 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 RNF157Q96PX1 679 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 ZNF670Q9BS34 389 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 HERPUD2Q9BSE4 406 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 CALN1Q9BXU9 219 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 TM6SF2Q9BZW4 377 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 CEP44Q9C0F1 390 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 NEUROG2Q9H2A3 272 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 SMOC1Q9H4F8 434 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 FBRSQ9HAH7 460 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 RXFP3Q9NSD7 469 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 TMEM74BQ9NUR3 256 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 ANKRD36A6QL64 1941 aa13.34□□□□□ -0.27
TPM3-216ENST00000473036 KNL1Q8NG31 2342 aa13.33□□□□□ -0.28
TPM3-216ENST00000473036 KRT86O43790 486 aa13.33□□□□□ -0.28
TPM3-216ENST00000473036 MAFKO60675 156 aa13.33□□□□□ -0.28
TPM3-216ENST00000473036 IL1BP01584 269 aa13.33□□□□□ -0.28
TPM3-216ENST00000473036 CEACAM1P13688 526 aa13.33□□□□□ -0.28
TPM3-216ENST00000473036 CSRP1P21291 193 aaKnown RBP13.33□□□□□ -0.28
TPM3-216ENST00000473036 CHRNA3P32297 505 aa13.33□□□□□ -0.28
TPM3-216ENST00000473036 CCNHP51946 323 aaPredicted RBP13.33□□□□□ -0.28
TPM3-216ENST00000473036 ZBTB16Q05516 673 aa13.33□□□□□ -0.28
TPM3-216ENST00000473036 PAFAH1B3Q15102 231 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms