RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 CLIC5Q9NZA1 410 aa4.94□□□□□ -1.62
TM4SF1-202ENST00000472441 ACTL7AQ9Y615 435 aa4.94□□□□□ -1.62
TM4SF1-202ENST00000472441 NUMBLQ9Y6R0 609 aa4.94□□□□□ -1.62
TM4SF1-202ENST00000472441 A8MUI8 341 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 CCL22O00626 93 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 PHGDHO43175 533 aaKnown RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 ITM2AO43736 263 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 TSPAN3O60637 253 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 PLIN3O60664 434 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 RAMP2O60895 175 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 DNAJC6O75061 913 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 GJB3O75712 270 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 UNC5CO95185 931 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 AHSGP02765 367 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 C2P06681 752 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 KRT16P08779 473 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 DLDP09622 509 aaKnown RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 HTR7P34969 479 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 ATP5C1P36542 298 aaKnown RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 GLRBP48167 497 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 PSEN1P49768 467 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 MNAT1P51948 309 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 MPP1Q00013 466 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 ZNF33AQ06730 810 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 NAB1Q13506 487 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 THOC5Q13769 683 aaKnown RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 USP10Q14694 798 aaKnown RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 USP41Q3LFD5 358 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 ARTNQ5T4W7 220 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 IL31Q6EBC2 164 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 DENND5AQ6IQ26 1287 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 KYAT3Q6YP21 454 aaKnown RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 SLC39A5Q6ZMH5 540 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 ALYREFQ86V81 257 aaKnown RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 DENND1CQ8IV53 801 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 PARP9Q8IXQ6 854 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 LRRC43Q8N309 656 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 SPATA6LQ8N4H0 392 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 AGR3Q8TD06 166 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 ACMSDQ8TDX5 336 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 AUTS2Q8WXX7 1259 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 MOCOSQ96EN8 888 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 PRR11Q96HE9 360 aaPredicted RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 VPS39Q96JC1 886 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 SCYL1Q96KG9 808 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 PRDM5Q9NQX1 630 aaPredicted RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 ENTPD7Q9NQZ7 604 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 TXLNGQ9NUQ3 528 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 TMEM248Q9NWD8 314 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 ARMCX1Q9P291 453 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 TLK1Q9UKI8 766 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 EMCNQ9ULC0 261 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 A0A0D9SEW6 157 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 F5H5T6 163 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 AP3B1O00203 1094 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 BUD23O43709 281 aaKnown RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 TBC1D4O60343 1298 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 SEC24AO95486 1093 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 TACR2P21452 398 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 SLC1A6P48664 564 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 SERPINB8P50452 374 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 NDST2P52849 883 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 LIMK2P53671 638 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 AQP5P55064 265 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 PRMT2P55345 433 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 ITGA9Q13797 1035 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 HNRNPDQ14103 355 aaKnown RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 IKBKEQ14164 716 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 ZNF460Q14592 562 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 PDPK2PQ6A1A2 396 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 NADSYN1Q6IA69 706 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 C16orf59Q7L2K0 433 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 CLNKQ7Z7G1 428 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 TTC7BQ86TV6 843 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 RNF135Q8IUD6 432 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 SLC41A1Q8IVJ1 513 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 ZNF683Q8IZ20 524 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 UMODL1-AS1Q8N2C9 162 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 DNAJC5GQ8N7S2 189 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 GPATCH11Q8N954 259 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 BHMTQ93088 406 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 SPATA17Q96L03 361 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 BEGAINQ9BUH8 593 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 KIFC1Q9BW19 673 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 SMPD4Q9NXE4 827 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 IL37Q9NZH6 218 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 SIRPGQ9P1W8 387 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 PPARGC1AQ9UBK2 798 aaKnown RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 DNMT3LQ9UJW3 386 aa4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 RUVBL2Q9Y230 463 aaKnown RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 NYNRINQ9P2P1 1898 aaKnown RBP4.93□□□□□ -1.62
TM4SF1-202ENST00000472441 FAM92AA1XBS5 289 aa4.92□□□□□ -1.62
TM4SF1-202ENST00000472441 CFAP73A6NFT4 308 aa4.92□□□□□ -1.62
TM4SF1-202ENST00000472441 GOLGA8CPA6NN73 597 aa4.92□□□□□ -1.62
TM4SF1-202ENST00000472441 WASH4PA8MWX3 477 aa4.92□□□□□ -1.62
TM4SF1-202ENST00000472441 BIRC5O15392 142 aa4.92□□□□□ -1.62
TM4SF1-202ENST00000472441 TIMM44O43615 452 aa4.92□□□□□ -1.62
TM4SF1-202ENST00000472441 CACNG3O60359 315 aa4.92□□□□□ -1.62
TM4SF1-202ENST00000472441 HAUS5O94927 633 aa4.92□□□□□ -1.62
TM4SF1-202ENST00000472441 PIRTP0C851 137 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms