RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 HNRNPDQ14103 355 aaKnown RBP12.52□□□□□ -0.41
PRKCB-205ENST00000472066 MYLK3Q32MK0 819 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 ATXN7L2Q5T6C5 722 aaPredicted RBP12.52□□□□□ -0.41
PRKCB-205ENST00000472066 CCDC181Q5TID7 509 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 MARC1Q5VT66 337 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 ZNF776Q68DI1 518 aaPredicted RBP12.52□□□□□ -0.41
PRKCB-205ENST00000472066 B4GALNT4Q76KP1 1039 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 DSG4Q86SJ6 1040 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 MMAAQ8IVH4 418 aaKnown RBP12.52□□□□□ -0.41
PRKCB-205ENST00000472066 CCDC13Q8IYE1 715 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 RYBPQ8N488 228 aaPredicted RBP12.52□□□□□ -0.41
PRKCB-205ENST00000472066 TEX26Q8N6G2 289 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 TSEN2Q8NCE0 465 aaKnown RBP12.52□□□□□ -0.41
PRKCB-205ENST00000472066 CHST14Q8NCH0 376 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 ZBTB44Q8NCP5 570 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 TMIEQ8NEW7 156 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 MAML1Q92585 1016 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 HAUS1Q96CS2 278 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 PSKH2Q96QS6 385 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 HEPHQ9BQS7 1158 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 CINPQ9BW66 212 aaPredicted RBP12.52□□□□□ -0.41
PRKCB-205ENST00000472066 BRD8Q9H0E9 1235 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 ITM2CQ9NQX7 267 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 SEPT3Q9UH03 358 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 IL36AQ9UHA7 158 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 SARDHQ9UL12 918 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 PPM1HQ9ULR3 514 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 KMT2EQ8IZD2 1858 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 WDFY4Q6ZS81 3184 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 MUSKO15146 869 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 ZNF217O75362 1048 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 IL1BP01584 269 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 DNTTP04053 509 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 CTSLP07711 333 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 CCNB1P14635 433 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 SLC8A1P32418 973 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 RGRP47804 291 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 CSNK1DP48730 415 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 PTPN5P54829 565 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 GNG11P61952 73 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 AP1B1Q10567 949 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 KLF1Q13351 362 aaPredicted RBP12.51□□□□□ -0.41
PRKCB-205ENST00000472066 NOMO1Q15155 1222 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 CST6Q15828 149 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 USP39Q53GS9 565 aaKnown RBP12.51□□□□□ -0.41
PRKCB-205ENST00000472066 HS1BP3Q53T59 392 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 ARSIQ5FYB1 569 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 SEL1L2Q5TEA6 688 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 CACUL1Q86Y37 369 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 C17orf53Q8N3J3 647 aaPredicted RBP12.51□□□□□ -0.41
PRKCB-205ENST00000472066 PGBD5Q8N414 524 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 OR6K2Q8NGY2 324 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 PIP4K2CQ8TBX8 421 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 TFB1MQ8WVM0 346 aaKnown RBP12.51□□□□□ -0.41
PRKCB-205ENST00000472066 VOPP1Q96AW1 172 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 EXOC2Q96KP1 924 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 GDAP1L1Q96MZ0 367 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 IRF2BPLQ9H1B7 796 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 USP36Q9P275 1121 aaKnown RBP12.51□□□□□ -0.41
PRKCB-205ENST00000472066 EVLQ9UI08 416 aaPredicted RBP12.51□□□□□ -0.41
PRKCB-205ENST00000472066 SCML1Q9UN30 329 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 INVSQ9Y283 1065 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 PCDHGA2Q9Y5H1 932 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 WASF2Q9Y6W5 498 aa12.51□□□□□ -0.41
PRKCB-205ENST00000472066 TCRBV7S2A1N4TA0A589 114 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 HACD1B0YJ81 288 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 C1QTNF3-AMACRE9PGA6 284 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 RNF103O00237 685 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 KRIT1O00522 736 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 MID1O15344 667 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 INSIG1O15503 277 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 HRO43593 1189 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 LILRB5O75023 590 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 IGSF6O95976 241 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 ADH1BP00325 375 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 PRNPP04156 253 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 ATP1A1P05023 1023 aaKnown RBP12.5□□□□□ -0.41
PRKCB-205ENST00000472066 C5AR1P21730 350 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 GKP32189 559 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 CXCR5P32302 372 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 CNR2P34972 360 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 P2RY2P41231 377 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 MMP13P45452 471 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 PSMD8P48556 350 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 TPMTP51580 245 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 OTUD4Q01804 1114 aaKnown RBP12.5□□□□□ -0.41
PRKCB-205ENST00000472066 SRSF5Q13243 272 aaKnown RBP12.5□□□□□ -0.41
PRKCB-205ENST00000472066 XRCC4Q13426 336 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 BYSLQ13895 437 aaKnown RBP12.5□□□□□ -0.41
PRKCB-205ENST00000472066 ZNF235Q14590 738 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 PRKD1Q15139 912 aaPredicted RBP12.5□□□□□ -0.41
PRKCB-205ENST00000472066 MAP7D1Q3KQU3 841 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 FAM46CQ5VWP2 391 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 SRLQ86TD4 932 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 ZC3H18Q86VM9 953 aaKnown RBP12.5□□□□□ -0.41
PRKCB-205ENST00000472066 SLC13A5Q86YT5 568 aaPredicted RBP12.5□□□□□ -0.41
PRKCB-205ENST00000472066 BBS5Q8N3I7 341 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 TTC13Q8NBP0 860 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 ACTL9Q8TC94 416 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 RLN3Q8WXF3 142 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms