RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 ATP8A1Q9Y2Q0 1164 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 AAR2Q9Y312 384 aaKnown RBP9.34□□□□□ -0.91
PTPRE-207ENST00000471218 NFS1Q9Y697 457 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 GREB1Q4ZG55 1949 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 MYO16Q9Y6X6 1858 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 A0A087WUV0 522 aaPredicted RBP9.33□□□□□ -0.92
PTPRE-207ENST00000471218 TRAV19A0A0A6YYK7 116 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 E2F8A0AVK6 867 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 ILVBLA1L0T0 632 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 RAMP2O60895 175 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 ANXA9O76027 345 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 TBX18O95935 607 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 VAV1P15498 845 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 CES1P23141 567 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 PTPN3P26045 913 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 GDI1P31150 447 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 CHKAP35790 457 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 MAGEA4P43358 317 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 VPS41P49754 854 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 BASP1P80723 227 aaKnown RBP9.33□□□□□ -0.92
PTPRE-207ENST00000471218 AP1B1Q10567 949 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 ILF2Q12905 390 aaKnown RBP9.33□□□□□ -0.92
PTPRE-207ENST00000471218 NR1H3Q13133 447 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 FZD5Q13467 585 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 PRPSAP1Q14558 356 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 TRIP13Q15645 432 aaPredicted RBP9.33□□□□□ -0.92
PTPRE-207ENST00000471218 CCDC38Q502W7 563 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 ARHGAP15Q53QZ3 475 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 FAM133BQ5BKY9 247 aaKnown RBP9.33□□□□□ -0.92
PTPRE-207ENST00000471218 FAM78AQ5JUQ0 283 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 PRSS36Q5K4E3 855 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 AGBL2Q5U5Z8 902 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 IL31Q6EBC2 164 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 FBXL22Q6P050 247 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 Q6ZNB5 142 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 HTR3DQ70Z44 454 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 LINC00523Q86TU6 105 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 LONP2Q86WA8 852 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 RALGPS2Q86X27 583 aaPredicted RBP9.33□□□□□ -0.92
PTPRE-207ENST00000471218 HJURPQ8NCD3 748 aaPredicted RBP9.33□□□□□ -0.92
PTPRE-207ENST00000471218 TSEN2Q8NCE0 465 aaKnown RBP9.33□□□□□ -0.92
PTPRE-207ENST00000471218 NSMCE1Q8WV22 266 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 OTUB2Q96DC9 234 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 LOXL4Q96JB6 756 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 ZFRQ96KR1 1074 aaKnown RBP9.33□□□□□ -0.92
PTPRE-207ENST00000471218 RPRD1AQ96P16 312 aaPredicted RBP9.33□□□□□ -0.92
PTPRE-207ENST00000471218 SERPINB12Q96P63 405 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 ZIM3Q96PE6 472 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 LGMNQ99538 433 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 SIK2Q9H0K1 926 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 EPB41L4BQ9H329 900 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 CDC42EP4Q9H3Q1 356 aaKnown RBP9.33□□□□□ -0.92
PTPRE-207ENST00000471218 KIF9Q9HAQ2 790 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 VPS45Q9NRW7 570 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 OBP2AQ9NY56 170 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 XPO7Q9UIA9 1087 aaKnown RBP9.33□□□□□ -0.92
PTPRE-207ENST00000471218 PLAAQ9Y263 795 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 TBC1D30Q9Y2I9 924 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 PIAS3Q9Y6X2 628 aa9.33□□□□□ -0.92
PTPRE-207ENST00000471218 DOCK6Q96HP0 2047 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 CCDC163A0A0D9SF12 145 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 E7EVH7 732 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 AGPSO00116 658 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 TRDMT1O14717 391 aaKnown RBP9.32□□□□□ -0.92
PTPRE-207ENST00000471218 MAFKO60675 156 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 ATG13O75143 517 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 CDH16O75309 829 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 AP2A1O95782 977 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 MOCS2O96007 188 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-207ENST00000471218 APRTP07741 180 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 ZSCAN5DPP0CG00 497 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 MBL2P11226 248 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-207ENST00000471218 CCNB1P14635 433 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 CEBPBP17676 345 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 HDCP19113 662 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 TGM1P22735 817 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 GABRR2P28476 465 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 CORO1AP31146 461 aaKnown RBP9.32□□□□□ -0.92
PTPRE-207ENST00000471218 GGCXP38435 758 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 GEMIN4P57678 1058 aaKnown RBP9.32□□□□□ -0.92
PTPRE-207ENST00000471218 IL10RBQ08334 325 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 DMWDQ09019 674 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 IFFO1Q0D2I5 559 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 NAB1Q13506 487 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 SERINC3Q13530 473 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 SLC5A9Q2M3M2 681 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 RALGPS1Q5JS13 557 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 ALG1LQ6GMV1 187 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 NAPEPLDQ6IQ20 393 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 LRRC8BQ6P9F7 803 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 PRR23BQ6ZRT6 265 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 ZNF567Q8N184 647 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 BBS5Q8N3I7 341 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 TEX26Q8N6G2 289 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 ARFGAP2Q8N6H7 521 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 ZSCAN18Q8TBC5 510 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-207ENST00000471218 PTCD2Q8WV60 388 aaKnown RBP9.32□□□□□ -0.92
PTPRE-207ENST00000471218 UBLCP1Q8WVY7 318 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-207ENST00000471218 FCRL5Q96RD9 977 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 PLA2G2FQ9BZM2 168 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms