RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 CUL1Q13616 776 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 TRIM25Q14258 630 aaKnown RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 RFTN1Q14699 578 aaPredicted RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 AANATQ16613 207 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 TSTQ16762 297 aaKnown RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 FAM209BQ5JX69 171 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 TMTC4Q5T4D3 741 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 IQSEC1Q6DN90 963 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 PGBD2Q6P3X8 592 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 FAM111BQ6SJ93 734 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 ISLR2Q6UXK2 745 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 ESPNLQ6ZVH7 1005 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 GLRX5Q86SX6 157 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 TADA2BQ86TJ2 420 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 PSTKQ8IV42 348 aaKnown RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 MFN1Q8IWA4 741 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 GSPT2Q8IYD1 628 aaKnown RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 Q8N1X5 172 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 ZNF808Q8N4W9 903 aaPredicted RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 ZNF527Q8NB42 609 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 ZNF671Q8TAW3 534 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 GANCQ8TET4 914 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 EXTL1Q92935 676 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 PEX13Q92968 403 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 PPP2R3CQ969Q6 453 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 EDC3Q96F86 508 aaKnown RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 FAM20AQ96MK3 541 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 CITED2Q99967 270 aaPredicted RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 STK33Q9BYT3 514 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 API5Q9BZZ5 524 aaKnown RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 AGO3Q9H9G7 860 aaKnown RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 COPS7BQ9H9Q2 264 aaPredicted RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 SARS2Q9NP81 518 aaKnown RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 PARPBPQ9NWS1 579 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 HMGXB4Q9UGU5 601 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 DPP7Q9UHL4 492 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 CLDN16Q9Y5I7 305 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 RBM8AQ9Y5S9 174 aaKnown RBP5.87□□□□□ -1.47
LRCH3-212ENST00000466845 MYPNQ86TC9 1320 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 SBNO1A3KN83 1393 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 PLEKHG1Q9ULL1 1385 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 DIP2AQ14689 1571 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 NWD1Q149M9 1564 aa5.87□□□□□ -1.47
LRCH3-212ENST00000466845 ZFYVE9O95405 1425 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 MSH6P52701 1360 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 MAPK8IP3Q9UPT6 1336 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 C15orf38-AP3S2A0A0A6YYH1 394 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 IFIT3O14879 490 aaKnown RBP5.86□□□□□ -1.47
LRCH3-212ENST00000466845 ATP8B1O43520 1251 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 BUB1O43683 1085 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 TBX10O75333 385 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 ERLIN2O94905 339 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 HLA-DRAP01903 254 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 GALTP07902 379 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 TPBGLP0DKB5 382 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 POU2F1P14859 743 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 PEX2P28328 305 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 EEF1DP29692 281 aaKnown RBP5.86□□□□□ -1.47
LRCH3-212ENST00000466845 LSP1P33241 339 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 MCM7P33993 719 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 BMI1P35226 326 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 PPP1R2P41236 205 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 HTR2BP41595 481 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 RABIFP47224 123 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 GCLCP48506 637 aaPredicted RBP5.86□□□□□ -1.47
LRCH3-212ENST00000466845 MAPK10P53779 464 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 ALDH18A1P54886 795 aaKnown RBP5.86□□□□□ -1.47
LRCH3-212ENST00000466845 VBP1P61758 197 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 TRA2BP62995 288 aaKnown RBP5.86□□□□□ -1.47
LRCH3-212ENST00000466845 SMAD3P84022 425 aaKnown RBP5.86□□□□□ -1.47
LRCH3-212ENST00000466845 PTH1RQ03431 593 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 TAP2Q03519 686 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 LRMPQ12912 555 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 ITGA7Q13683 1181 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 PTK2BQ14289 1009 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 LRRC23Q53EV4 343 aaPredicted RBP5.86□□□□□ -1.47
LRCH3-212ENST00000466845 FBXO47Q5MNV8 452 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 SHEQ5VZ18 495 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 CES4AQ5XG92 561 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 TBC1D9BQ66K14 1250 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 PPP1R2P3Q6NXS1 205 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 SLC22A25Q6T423 547 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 TMPRSS6Q8IU80 811 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 FBXW8Q8N3Y1 598 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 HDDC3Q8N4P3 179 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 AMER2Q8N7J2 671 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 TSPYL6Q8N831 410 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 DNAAF3Q8N9W5 541 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 LPCAT1Q8NF37 534 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 OR2W6PQ8NHA6 318 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 PHOSPHO2Q8TCD6 241 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 EFHD2Q96C19 240 aaPredicted RBP5.86□□□□□ -1.47
LRCH3-212ENST00000466845 SECISBP2Q96T21 854 aaKnown RBP5.86□□□□□ -1.47
LRCH3-212ENST00000466845 CGREF1Q99674 301 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 SH3GL2Q99962 352 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 C9orf16Q9BUW7 83 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 TRIM62Q9BVG3 475 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 PACSIN1Q9BY11 444 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 FAM129AQ9BZQ8 928 aa5.86□□□□□ -1.47
LRCH3-212ENST00000466845 CARD9Q9H257 536 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms