RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 GCNT7Q6ZNI0 430 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 SLC25A45Q8N413 288 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 OR13H1Q8NG92 308 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 JOSD2Q8TAC2 188 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 SLC30A5Q8TAD4 765 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 KLHL11Q9NVR0 708 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 OR12D3Q9UGF7 316 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 ACTL7AQ9Y615 435 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 TRIM38O00635 465 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 SIGLEC6O43699 453 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 GJB6O95452 261 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 ADRB3P13945 408 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 DGKAP23743 735 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 ACP1P24666 158 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 L1CAMP32004 1257 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 ADRA1BP35368 520 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 ACVRL1P37023 503 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 ETFBP38117 255 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 NRG1Q02297 640 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-206ENST00000466532 TARDBPQ13148 414 aaKnown RBP eCLIP19.52■□□□□ 0.72
COL9A3-206ENST00000466532 MAPK8IP2Q13387 824 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-206ENST00000466532 HS1BP3Q53T59 392 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 FKBP15Q5T1M5 1219 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 MANEALQ5VSG8 457 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 TRIM72Q6ZMU5 477 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 GPT2Q8TD30 523 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 TM6SF2Q9BZW4 377 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 ZDHHC6Q9H6R6 413 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 NDFIP2Q9NV92 336 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 DNAI1Q9UI46 699 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 ANKRD36A6QL64 1941 aa19.52■□□□□ 0.72
COL9A3-206ENST00000466532 C2CD4BA6NLJ0 364 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 A6NNZ2 444 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 EPHB6O15197 1021 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 CD160O95971 181 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 MAPKAPK2P49137 400 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 RPS21P63220 83 aaKnown RBP19.51■□□□□ 0.71
COL9A3-206ENST00000466532 DAB2P98082 770 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 ZNF211Q13398 564 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-206ENST00000466532 COL9A2Q14055 689 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-206ENST00000466532 KIAA1161Q6NSJ0 714 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 PARS2Q7L3T8 475 aaKnown RBP19.51■□□□□ 0.71
COL9A3-206ENST00000466532 STRADAQ7RTN6 431 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 PTAR1Q7Z6K3 402 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-206ENST00000466532 ABI3BPQ7Z7G0 1075 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 RYBPQ8N488 228 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-206ENST00000466532 ARHGEF2Q92974 986 aaKnown RBP19.51■□□□□ 0.71
COL9A3-206ENST00000466532 LRIG1Q96JA1 1093 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 DCBLD2Q96PD2 775 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 SLC17A9Q9BYT1 436 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 OSBPL2Q9H1P3 480 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 LMBRD1Q9NUN5 540 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 UCKL1Q9NWZ5 548 aa19.51■□□□□ 0.71
COL9A3-206ENST00000466532 HECAQ9UBI9 543 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-206ENST00000466532 A0A087WV48 116 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 FAM72CH0Y354 149 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 FFAR2O15552 330 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 PIAS2O75928 621 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 UNGP13051 313 aaPredicted RBP19.5■□□□□ 0.71
COL9A3-206ENST00000466532 RHOQP17081 205 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 STAT1P42224 750 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 PTPN9P43378 593 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 NSFP46459 744 aaKnown RBP19.5■□□□□ 0.71
COL9A3-206ENST00000466532 FAM72AQ5TYM5 149 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 FAM72DQ6L9T8 149 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 Q6ZSR6 202 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 NLRP14Q86W24 1093 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 FAM72BQ86X60 149 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 SLC22A18ASQ8N1D0 253 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 CCDC185Q8N715 623 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 OR6K2Q8NGY2 324 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 OR4C6Q8NH72 309 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 FAM174AQ8TBP5 190 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 FAM172AQ8WUF8 416 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 ISG20Q96AZ6 181 aaKnown RBP19.5■□□□□ 0.71
COL9A3-206ENST00000466532 TBC1D31Q96DN5 1066 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 FEM1CQ96JP0 617 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 PCMTD1Q96MG8 357 aaPredicted RBP19.5■□□□□ 0.71
COL9A3-206ENST00000466532 MAGEB5Q9BZ81 275 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 RETREG1Q9H6L5 497 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 CAAP1Q9H8G2 361 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 FANCLQ9NW38 375 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 TMEM248Q9NWD8 314 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 DAAM1Q9Y4D1 1078 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 FADS3Q9Y5Q0 445 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 HS3ST3A1Q9Y663 406 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 AK5Q9Y6K8 562 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 ATRXP46100 2492 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 IGSF10Q6WRI0 2623 aa19.5■□□□□ 0.71
COL9A3-206ENST00000466532 CXorf51AA0A1B0GTR3 108 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 LRIG2O94898 1065 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 PAK4O96013 591 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-206ENST00000466532 PLEKP08567 350 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-206ENST00000466532 KRT3P12035 628 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 GKP32189 559 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 HDAC4P56524 1084 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 GEMIN4P57678 1058 aaKnown RBP19.49■□□□□ 0.71
COL9A3-206ENST00000466532 SEMG2Q02383 582 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 PTP4A2Q12974 167 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 FGL2Q14314 439 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms