RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 KCNU1A8MYU2 1149 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 M0QYT0 321 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 GRM6O15303 877 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 IRAK2O43187 625 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 CLASP2O75122 1294 aaKnown RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 TADA3O75528 432 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 GRAP2O75791 330 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 LATS1O95835 1130 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 OLFM2O95897 454 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 GLUD1P00367 558 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 IGLV3-27P01718 113 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 FGGP02679 453 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 CA3P07451 260 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 HNRNPA1P09651 372 aaKnown RBP eCLIP5.66□□□□□ -1.5
VPS41-211ENST00000466017 RAC2P15153 192 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 RPL17P18621 184 aaKnown RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 POU3F3P20264 500 aaPredicted RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 DNAJB1P25685 340 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 KLRC2P26717 231 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 CCR1P32246 355 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 CHRNA3P32297 505 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 CXCR5P32302 372 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 ATP5C1P36542 298 aaKnown RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 CDKN2BP42772 138 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 FNTAP49354 379 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 GPR15P49685 360 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 SULT1E1P49888 294 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 CLCN4P51793 760 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 RABGGTBP53611 331 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 MLLT6P55198 1093 aaPredicted RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 COG7P83436 770 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 CYP4F3Q08477 520 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 SEMA3BQ13214 749 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 KCNC3Q14003 757 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 TFDP2Q14188 446 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 SIX1Q15475 284 aaPredicted RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 LONRF2Q1L5Z9 754 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 LRIT3Q3SXY7 679 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 ATP13A4Q4VNC1 1196 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 CCDC181Q5TID7 509 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 OTUD1Q5VV17 481 aaPredicted RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 MFSD7Q6UXD7 560 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 TMEM184AQ6ZMB5 413 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 SPOCD1Q6ZMY3 1216 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 BBS12Q6ZW61 710 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 BZW1Q7L1Q6 419 aaKnown RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 MAATS1Q7Z4T9 603 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 SLCO6A1Q86UG4 719 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 UNC45BQ8IWX7 931 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 TDHQ8IZJ6 230 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 OXR1Q8N573 874 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 TTC9BQ8N6N2 239 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 KCTD6Q8NC69 237 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 STKLD1Q8NE28 680 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 CCDC26Q8TAB7 109 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 DQX1Q8TE96 717 aaKnown RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 RAPGEF5Q92565 580 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 UBXN4Q92575 508 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 NDRG1Q92597 394 aaKnown RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 SLCO2A1Q92959 643 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 FBXO32Q969P5 355 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 ZNF512Q96ME7 567 aaPredicted RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 RNF157Q96PX1 679 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 SEPT5Q99719 369 aaPredicted RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 TCF25Q9BQ70 676 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 C17orf80Q9BSJ5 609 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 SLITRK6Q9H5Y7 841 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 PCDH18Q9HCL0 1135 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 ALG13Q9NP73 1137 aaKnown RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 MTMR10Q9NXD2 777 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 ZDHHC7Q9NXF8 308 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 DONSONQ9NYP3 566 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 TRPM5Q9NZQ8 1165 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 PCYOX1Q9UHG3 505 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 SLC12A6Q9UHW9 1150 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 PLA2G2DQ9UNK4 145 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 YIPF1Q9Y548 306 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 INSL5Q9Y5Q6 135 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 RAD54BQ9Y620 910 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 CLUHO75153 1309 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 PLXNA3P51805 1871 aa5.66□□□□□ -1.5
VPS41-211ENST00000466017 ZNF638Q14966 1978 aaKnown RBP5.66□□□□□ -1.5
VPS41-211ENST00000466017 PLXNA4Q9HCM2 1894 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 GOLGA6L10A0A0M3HER8 536 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.65□□□□□ -1.5
VPS41-211ENST00000466017 HIDE1A8MVS5 230 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 GRXCR1A8MXD5 290 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 H0YGN5 161 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 APOC4-APOC2K7ER74 178 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 ARNTLO00327 626 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 KRIT1O00522 736 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 PRRG1O14668 218 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 TBX1O43435 398 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 OAS1P00973 400 aaKnown RBP5.65□□□□□ -1.5
VPS41-211ENST00000466017 APOC2P02655 101 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 LRG1P02750 347 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 RARGP13631 454 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 PTPN2P17706 415 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 TGM2P21980 687 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 MCM3P25205 808 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms