RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 CCDC15Q0P6D6 951 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 HNRNPDQ14103 355 aaKnown RBP17.23■□□□□ 0.35
USP39-211ENST00000465282 GRM3Q14832 879 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 RPS6KA1Q15418 735 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 CYTH1Q15438 398 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 SLC36A4Q6YBV0 504 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 BBS12Q6ZW61 710 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 USP30Q70CQ3 517 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 KBTBD6Q86V97 674 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 TP53INP2Q8IXH6 220 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 GDAP1L1Q96MZ0 367 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 PSKH2Q96QS6 385 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 HEPHQ9BQS7 1158 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 OSBPL8Q9BZF1 889 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 TPSD1Q9BZJ3 242 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 SEPT3Q9UH03 358 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 IL36AQ9UHA7 158 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 AMACRQ9UHK6 382 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 RAPGEFL1Q9UHV5 662 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 PPM1HQ9ULR3 514 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 HEY1Q9Y5J3 304 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 CEP192Q8TEP8 1941 aa17.23■□□□□ 0.35
USP39-211ENST00000465282 MATN3O15232 486 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 IL1BP01584 269 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 PYGMP11217 842 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 KRT10P13645 584 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 CHRNA3P32297 505 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 SLC8A1P32418 973 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 DNA2P51530 1060 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 SLC10A2Q12908 348 aaPredicted RBP17.22■□□□□ 0.35
USP39-211ENST00000465282 LBRQ14739 615 aaKnown RBP17.22■□□□□ 0.35
USP39-211ENST00000465282 MAP7D1Q3KQU3 841 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 SPDYCQ5MJ68 293 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 MARC1Q5VT66 337 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 KAZNQ674X7 775 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 DPY19L3Q6ZPD9 716 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 ARHGAP36Q6ZRI8 547 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 MMAAQ8IVH4 418 aaKnown RBP17.22■□□□□ 0.35
USP39-211ENST00000465282 MAML1Q92585 1016 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 P3H4Q92791 437 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 OLFM3Q96PB7 478 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 CINPQ9BW66 212 aaPredicted RBP17.22■□□□□ 0.35
USP39-211ENST00000465282 OSBPL1AQ9BXW6 950 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 TNKS2Q9H2K2 1166 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 HECAQ9UBI9 543 aaPredicted RBP17.22■□□□□ 0.35
USP39-211ENST00000465282 PACSIN2Q9UNF0 486 aaPredicted RBP17.22■□□□□ 0.35
USP39-211ENST00000465282 NCKAP1Q9Y2A7 1128 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 ACTL7AQ9Y615 435 aa17.22■□□□□ 0.35
USP39-211ENST00000465282 HRO43593 1189 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 BNIP3LO60238 219 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 ZNF189O75820 626 aaPredicted RBP17.21■□□□□ 0.35
USP39-211ENST00000465282 PEX11BO96011 259 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 MAPK8P45983 427 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 TPMTP51580 245 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 CCNHP51946 323 aaPredicted RBP17.21■□□□□ 0.35
USP39-211ENST00000465282 DYNLT1P63172 113 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 PPIDQ08752 370 aaKnown RBP17.21■□□□□ 0.35
USP39-211ENST00000465282 MYLK3Q32MK0 819 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 RALGPS1Q5JS13 557 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 LEKR1Q6ZMV7 388 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 TEX26Q8N6G2 289 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 NETO2Q8NC67 525 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 CCNYQ8ND76 341 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 PIP4K2CQ8TBX8 421 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 PPP1R16AQ96I34 528 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 ZC3H10Q96K80 434 aaKnown RBP17.21■□□□□ 0.35
USP39-211ENST00000465282 CPEB1Q9BZB8 566 aaKnown RBP17.21■□□□□ 0.35
USP39-211ENST00000465282 TM6SF2Q9BZW4 377 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 SLC6A17Q9H1V8 727 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 CARD9Q9H257 536 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 EPC1Q9H2F5 836 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 PABPC3Q9H361 631 aaKnown RBP17.21■□□□□ 0.35
USP39-211ENST00000465282 LHX3Q9UBR4 397 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 FZD4Q9ULV1 537 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 JRKLQ9Y4A0 524 aa17.21■□□□□ 0.35
USP39-211ENST00000465282 THADAQ6YHU6 1953 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 ANKRD36A6QL64 1941 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 PROB1E7EW31 1015 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 APOC4-APOC2K7ER74 178 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 MTSS1O43312 755 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 KIF5CO60282 957 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 APOC2P02655 101 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 CES1P23141 567 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 PLA2G5P39877 138 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 SLC10A7Q0GE19 358 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 XRCC4Q13426 336 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 ZNF235Q14590 738 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 CCDC181Q5TID7 509 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 CCDC13Q8IYE1 715 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 RYBPQ8N488 228 aaPredicted RBP17.2■□□□□ 0.34
USP39-211ENST00000465282 TTC13Q8NBP0 860 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 HCAR2Q8TDS4 363 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 ERLEC1Q96DZ1 483 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 HEMGNQ9BXL5 484 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 PCED1AQ9H1Q7 454 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 SGK2Q9HBY8 427 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 KCND1Q9NSA2 647 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 FBXL12Q9NXK8 326 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 WASF2Q9Y6W5 498 aa17.2■□□□□ 0.34
USP39-211ENST00000465282 R4GN57 208 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms