RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 OSBPL8Q9BZF1 889 aa12.08□□□□□ -0.48
APTX-213ENST00000465003 RRAGDQ9NQL2 400 aaPredicted RBP12.08□□□□□ -0.48
APTX-213ENST00000465003 LHX3Q9UBR4 397 aa12.08□□□□□ -0.48
APTX-213ENST00000465003 FBXO4Q9UKT5 387 aa12.08□□□□□ -0.48
APTX-213ENST00000465003 HCN4Q9Y3Q4 1203 aa12.08□□□□□ -0.48
APTX-213ENST00000465003 NPC1O15118 1278 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 LEFTY1O75610 366 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 ALDH1A2O94788 518 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 PAPSS2O95340 614 aaPredicted RBP12.07□□□□□ -0.48
APTX-213ENST00000465003 PIGNO95427 931 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 ATP1A1P05023 1023 aaKnown RBP12.07□□□□□ -0.48
APTX-213ENST00000465003 RPS6KA1Q15418 735 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 ARSIQ5FYB1 569 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 CCDC181Q5TID7 509 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 PRR23BQ6ZRT6 265 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 ARMCX6Q7L4S7 300 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 CAMKK1Q8N5S9 505 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 AADATQ8N5Z0 425 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 TRIM58Q8NG06 486 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 GANCQ8TET4 914 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 VOPP1Q96AW1 172 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 CALR3Q96L12 384 aaKnown RBP12.07□□□□□ -0.48
APTX-213ENST00000465003 RETREG1Q9H6L5 497 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 SMARCAL1Q9NZC9 954 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 HECAQ9UBI9 543 aaPredicted RBP12.07□□□□□ -0.48
APTX-213ENST00000465003 SUN2Q9UH99 717 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 GON4LQ3T8J9 2241 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 ANKRD36A6QL64 1941 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 CFAP54Q96N23 3096 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 PRR23AA6NEV1 266 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 FAM47DPA6NHR8 397 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 MIF4GDA9UHW6 222 aaKnown RBP12.07□□□□□ -0.48
APTX-213ENST00000465003 KPNA3O00505 521 aaPredicted RBP12.07□□□□□ -0.48
APTX-213ENST00000465003 ACADMP11310 421 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 TPMTP51580 245 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 IL10RBQ08334 325 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 ZBTB17Q13105 803 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 LBRQ14739 615 aaKnown RBP12.07□□□□□ -0.48
APTX-213ENST00000465003 CST6Q15828 149 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 PIP4K2CQ8TBX8 421 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 ATG4AQ8WYN0 398 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 OLFM3Q96PB7 478 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 WDR24Q96S15 920 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 CINPQ9BW66 212 aaPredicted RBP12.07□□□□□ -0.48
APTX-213ENST00000465003 RSPH9Q9H1X1 276 aaPredicted RBP12.07□□□□□ -0.48
APTX-213ENST00000465003 NT5MQ9NPB1 228 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 DONSONQ9NYP3 566 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 MBD1Q9UIS9 605 aaPredicted RBP12.07□□□□□ -0.48
APTX-213ENST00000465003 R3HDM2Q9Y2K5 976 aaKnown RBP12.07□□□□□ -0.48
APTX-213ENST00000465003 WASF2Q9Y6W5 498 aa12.07□□□□□ -0.48
APTX-213ENST00000465003 FANCGO15287 622 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 RNASEH2AO75792 299 aaKnown RBP12.06□□□□□ -0.48
APTX-213ENST00000465003 UGT2B4P06133 528 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 CHRNA3P32297 505 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 SLC8A1P32418 973 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 RECQLP46063 649 aaPredicted RBP12.06□□□□□ -0.48
APTX-213ENST00000465003 SCNN1BP51168 640 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 CLCN6P51797 869 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 OTUD4Q01804 1114 aaKnown RBP12.06□□□□□ -0.48
APTX-213ENST00000465003 SEMG2Q02383 582 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 PPP2R5EQ16537 467 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 CARD16Q5EG05 197 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 ZNF776Q68DI1 518 aaPredicted RBP12.06□□□□□ -0.48
APTX-213ENST00000465003 LONP2Q86WA8 852 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 KDM1BQ8NB78 822 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 OR2AP1Q8NGE2 309 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 ACTL9Q8TC94 416 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 OR8D1Q8WZ84 308 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 P3H4Q92791 437 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 ZSCAN32Q9NX65 697 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 FANCMQ8IYD8 2048 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 DOCK9Q9BZ29 2069 aa12.06□□□□□ -0.48
APTX-213ENST00000465003 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 TARSL2A2RTX5 802 aaKnown RBP12.05□□□□□ -0.48
APTX-213ENST00000465003 ZSCAN5CA6NGD5 496 aaPredicted RBP12.05□□□□□ -0.48
APTX-213ENST00000465003 MCF2LO15068 1137 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 RPP40O75818 363 aaKnown RBP12.05□□□□□ -0.48
APTX-213ENST00000465003 DNTTP04053 509 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 PRKCGP05129 697 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 ACSL1P33121 698 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 DRD3P35462 400 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 ITKQ08881 620 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 TFDP2Q14188 446 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 ZNF235Q14590 738 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 TMCO4Q5TGY1 634 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 BBS12Q6ZW61 710 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 TMEFF1Q8IYR6 380 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 PCDH20Q8N6Y1 951 aaKnown RBP12.05□□□□□ -0.48
APTX-213ENST00000465003 ZBTB44Q8NCP5 570 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 ARRDC3Q96B67 414 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 NEUROG2Q9H2A3 272 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 FBXL12Q9NXK8 326 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 IL36AQ9UHA7 158 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 PPM1HQ9ULR3 514 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 THADAQ6YHU6 1953 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 GPR179Q6PRD1 2367 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 IGHV1OR15-9A0A0B4J2B8 117 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 ZNF487B1APH4 448 aa12.05□□□□□ -0.48
APTX-213ENST00000465003 ZBTB24O43167 697 aaPredicted RBP12.05□□□□□ -0.48
APTX-213ENST00000465003 HLA-DQB2P05538 268 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms