RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 LINC00205P59089 165 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 ROR2Q01974 943 aaKnown RBP6.32□□□□□ -1.4
PTCD3-205ENST00000464541 OTUD1Q5VV17 481 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-205ENST00000464541 DCAF12L2Q5VW00 463 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 NAPEPLDQ6IQ20 393 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 PELI3Q8N2H9 469 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 MAELQ96JY0 434 aaKnown RBP6.32□□□□□ -1.4
PTCD3-205ENST00000464541 EBF3Q9H4W6 596 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 PLAC1Q9HBJ0 212 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 NCKIPSDQ9NZQ3 722 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 IFT80Q9P2H3 777 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-205ENST00000464541 NLKQ9UBE8 527 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 PLEKHB1Q9UF11 243 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-205ENST00000464541 RAI2Q9Y5P3 530 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 DDTLA6NHG4 134 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-205ENST00000464541 MS4A18H0YCH9 400 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 KCNAB3O43448 404 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 IFIT1P09914 478 aaKnown RBP6.31□□□□□ -1.4
PTCD3-205ENST00000464541 PGM1P36871 562 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 PTPN9P43378 593 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 MAPK9P45984 424 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 CENPAP49450 140 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 CDH12P55289 794 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 TRPC3Q13507 836 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 GPR18Q14330 331 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 ODF3L2Q3SX64 289 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 IL20RBQ6UXL0 311 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 TEX45Q8NA69 505 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 DNAAF1Q8NEP3 725 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 TNIP2Q8NFZ5 429 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 CEP76Q8TAP6 659 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 URB1-AS1Q96HZ7 61 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 CLSTN3Q9BQT9 956 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTCD3-205ENST00000464541 SF3B5Q9BWJ5 86 aaKnown RBP6.31□□□□□ -1.4
PTCD3-205ENST00000464541 PHF7Q9BWX1 381 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-205ENST00000464541 GPR63Q9BZJ6 419 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 LMAN2LQ9H0V9 348 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 MROH8Q9H579 483 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 CXorf56Q9H5V9 222 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 EPHX3Q9H6B9 360 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 HIF1ANQ9NWT6 349 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 SAGE1Q9NXZ1 904 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 PLK2Q9NYY3 685 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 PGAP2Q9UHJ9 254 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 CNOT7Q9UIV1 285 aaKnown RBP6.31□□□□□ -1.4
PTCD3-205ENST00000464541 SLC13A4Q9UKG4 626 aa6.31□□□□□ -1.4
PTCD3-205ENST00000464541 RRN3P2A6NIE6 340 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 FAM90A8PA6NJQ4 464 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 EYA2O00167 538 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 TNFRSF13BO14836 293 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-205ENST00000464541 HOXC11O43248 304 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-205ENST00000464541 SPRY3O43610 288 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 FAM90A13PP0C7W8 464 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 FAM90A24PP0C7X0 464 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 GNLYP22749 145 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 ARSFP54793 590 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 NAA25Q14CX7 972 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 ME3Q16798 604 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 DNTTIP2Q5QJE6 756 aaKnown RBP6.3□□□□□ -1.4
PTCD3-205ENST00000464541 FAM83HQ6ZRV2 1179 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-205ENST00000464541 PRSS45Q7RTY3 260 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 ADGRG6Q86SQ4 1221 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 PATL1Q86TB9 770 aaKnown RBP6.3□□□□□ -1.4
PTCD3-205ENST00000464541 RBFAQ8N0V3 343 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 CADM3Q8N126 398 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 CPXM2Q8N436 756 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 C9orf106Q8NAJ2 232 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 PDP2Q9P2J9 529 aa6.3□□□□□ -1.4
PTCD3-205ENST00000464541 PER2O15055 1255 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 CLDN7O95471 211 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 SNHG28P0DPA3 235 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 PPP3CCP48454 512 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 SLC18A2Q05940 514 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 HNRNPA0Q13151 305 aaKnown RBP6.29□□□□□ -1.4
PTCD3-205ENST00000464541 MAPK7Q13164 816 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 PDXDC1Q6P996 788 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 ZNF549Q6P9A3 640 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 Q6ZTK2 550 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 CTU1Q7Z7A3 348 aaKnown RBP6.29□□□□□ -1.4
PTCD3-205ENST00000464541 GLCCI1Q86VQ1 547 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 MCPH1Q8NEM0 835 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 TBATAQ96M53 351 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 WACQ9BTA9 647 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 MRPL44Q9H9J2 332 aaKnown RBP6.29□□□□□ -1.4
PTCD3-205ENST00000464541 IL36RNQ9UBH0 155 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 TBX20Q9UMR3 447 aa6.29□□□□□ -1.4
PTCD3-205ENST00000464541 SRPRBQ9Y5M8 271 aaKnown RBP6.29□□□□□ -1.4
PTCD3-205ENST00000464541 LOC102724159A0A0B4J2E5 919 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 ARHGAP10A1A4S6 786 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 GAGE10A6NGK3 116 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 OR6C75A6NL08 312 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 VWA5AO00534 786 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 LCATP04180 440 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 PWP2Q15269 919 aaKnown RBP6.28□□□□□ -1.4
PTCD3-205ENST00000464541 C17orf99Q6UX52 265 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 ZCCHC10Q8TBK6 192 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 ATOH1Q92858 354 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-205ENST00000464541 TMEM18Q96B42 140 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 LYZL4Q96KX0 146 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms