RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 DAPK3O43293 454 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 PLRG1O43660 514 aaKnown RBP22.91■■□□□ 1.26
TRAF4-207ENST00000461195 BUB1O43683 1085 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 OPHN1O60890 802 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 MFAP3LO75121 409 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 CCNHP51946 323 aaPredicted RBP22.91■■□□□ 1.26
TRAF4-207ENST00000461195 SERINC3Q13530 473 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 TEAD4Q15561 434 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 PPP6R3Q5H9R7 873 aaPredicted RBP22.91■■□□□ 1.26
TRAF4-207ENST00000461195 LEKR1Q6ZMV7 388 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 RFX8Q6ZV50 586 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 NIPA2Q8N8Q9 360 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 BTBD6Q96KE9 485 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 HEPHQ9BQS7 1158 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 ORAI3Q9BRQ5 295 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 TM6SF2Q9BZW4 377 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 MYO1FO00160 1098 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 LEFTY1O75610 366 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 KCNA4P22459 653 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 CSNK1EP49674 416 aaKnown RBP22.9■■□□□ 1.26
TRAF4-207ENST00000461195 NDST2P52849 883 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 ADKP55263 362 aaKnown RBP22.9■■□□□ 1.26
TRAF4-207ENST00000461195 ASTE1Q2TB18 679 aaPredicted RBP22.9■■□□□ 1.26
TRAF4-207ENST00000461195 BOLA3Q53S33 107 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 OR2I1PQ8NGU4 316 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 CASKIN2Q8WXE0 1202 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 ARRDC3Q96B67 414 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 PPP1R16AQ96I34 528 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 TRIM5Q9C035 493 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 KLC2Q9H0B6 622 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 LRRC19Q9H756 370 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 DNAAF2Q9NVR5 837 aaKnown RBP22.9■■□□□ 1.26
TRAF4-207ENST00000461195 HECAQ9UBI9 543 aaPredicted RBP22.9■■□□□ 1.26
TRAF4-207ENST00000461195 WASF2Q9Y6W5 498 aa22.9■■□□□ 1.26
TRAF4-207ENST00000461195 ASCC3Q8N3C0 2202 aaKnown RBP22.89■■□□□ 1.26
TRAF4-207ENST00000461195 A0A1B0GVT2 93 aa22.89■■□□□ 1.25
TRAF4-207ENST00000461195 AKR1B10O60218 316 aa22.89■■□□□ 1.25
TRAF4-207ENST00000461195 GSRP00390 522 aa22.89■■□□□ 1.25
TRAF4-207ENST00000461195 IL1R2P27930 398 aa22.89■■□□□ 1.25
TRAF4-207ENST00000461195 GRIA4P48058 902 aa22.89■■□□□ 1.25
TRAF4-207ENST00000461195 HCAR3P49019 387 aa22.89■■□□□ 1.25
TRAF4-207ENST00000461195 SNRPD1P62314 119 aaKnown RBP22.89■■□□□ 1.25
TRAF4-207ENST00000461195 PIP5KL1Q5T9C9 394 aa22.89■■□□□ 1.25
TRAF4-207ENST00000461195 IL27RAQ6UWB1 636 aa22.89■■□□□ 1.25
TRAF4-207ENST00000461195 CNGA4Q8IV77 575 aa22.89■■□□□ 1.25
TRAF4-207ENST00000461195 RYBPQ8N488 228 aaPredicted RBP22.89■■□□□ 1.25
TRAF4-207ENST00000461195 ZNF564Q8TBZ8 553 aaPredicted RBP22.89■■□□□ 1.25
TRAF4-207ENST00000461195 CTNNBL1Q8WYA6 563 aaPredicted RBP22.89■■□□□ 1.25
TRAF4-207ENST00000461195 ZWILCHQ9H900 591 aa22.89■■□□□ 1.25
TRAF4-207ENST00000461195 PREBQ9HCU5 417 aa22.89■■□□□ 1.25
TRAF4-207ENST00000461195 LATO43561 262 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 TMCC1O94876 653 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 H2AFZP0C0S5 128 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 TCF4P15884 667 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 ERCC2P18074 760 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 PPP2CBP62714 309 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 RACK1P63244 317 aaKnown RBP22.88■■□□□ 1.25
TRAF4-207ENST00000461195 PPP2CAP67775 309 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 BNC1Q01954 994 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 DPYSL2Q16555 572 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 SMTNL2Q2TAL5 461 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 INO80DQ53TQ3 878 aaPredicted RBP22.88■■□□□ 1.25
TRAF4-207ENST00000461195 KCNT1Q5JUK3 1230 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 H2AFVQ71UI9 128 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 ERN2Q76MJ5 926 aaKnown RBP22.88■■□□□ 1.25
TRAF4-207ENST00000461195 ADAT2Q7Z6V5 191 aaKnown RBP22.88■■□□□ 1.25
TRAF4-207ENST00000461195 OR2AP1Q8NGE2 309 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 CELF6Q96J87 481 aaKnown RBP22.88■■□□□ 1.25
TRAF4-207ENST00000461195 CHP1Q99653 195 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 HDAC8Q9BY41 377 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 ZDHHC6Q9H6R6 413 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 EBF2Q9HAK2 575 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 CWC15Q9P013 229 aaKnown RBP22.88■■□□□ 1.25
TRAF4-207ENST00000461195 CTTNBP2NLQ9P2B4 639 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 UVRAGQ9P2Y5 699 aa22.88■■□□□ 1.25
TRAF4-207ENST00000461195 ARHGAP42A6NI28 874 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 AKR1B15C9JRZ8 316 aaPredicted RBP22.87■■□□□ 1.25
TRAF4-207ENST00000461195 H3BRJ5 948 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 RNF103O00237 685 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 KCNK5O95279 499 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 CER1O95813 267 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 CSRP1P21291 193 aaKnown RBP22.87■■□□□ 1.25
TRAF4-207ENST00000461195 ITGB7P26010 798 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 ARL4AP40617 200 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 TAS2R38P59533 333 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 TBX2Q13207 712 aaPredicted RBP22.87■■□□□ 1.25
TRAF4-207ENST00000461195 PRPF39Q86UA1 669 aaKnown RBP22.87■■□□□ 1.25
TRAF4-207ENST00000461195 TRIM69Q86WT6 500 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 TEKT4Q8WW24 435 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 HSPH1Q92598 858 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 LRIG1Q96JA1 1093 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 CCDC42Q96M95 316 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 SLC6A18Q96N87 628 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 PACSIN1Q9BY11 444 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 SLC39A8Q9C0K1 460 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 NHEJ1Q9H9Q4 299 aaPredicted RBP22.87■■□□□ 1.25
TRAF4-207ENST00000461195 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.87■■□□□ 1.25
TRAF4-207ENST00000461195 ANKRD6Q9Y2G4 727 aa22.87■■□□□ 1.25
TRAF4-207ENST00000461195 UPK3BL1B0FP48 263 aa22.86■■□□□ 1.25
TRAF4-207ENST00000461195 UPK3BL2E5RIL1 263 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms