RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 TMIEQ8NEW7 156 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 OR2T34Q8NGX1 318 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 OR14C36Q8NHC7 312 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 TEKT4Q8WW24 435 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 HSPH1Q92598 858 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 ISG20Q96AZ6 181 aaKnown RBP15.23■□□□□ 0.03
ATG4B-213ENST00000460211 MRFAP1L1Q96HT8 127 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 PPP1R16AQ96I34 528 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 BTBD6Q96KE9 485 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 KCTD15Q96SI1 283 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-213ENST00000460211 TMEM121BQ9BXQ6 578 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-213ENST00000460211 TNKS2Q9H2K2 1166 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 C6orf106Q9H6K1 298 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-213ENST00000460211 IL36AQ9UHA7 158 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-213ENST00000460211 DOCK4Q8N1I0 1966 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 ARHGAP42A6NI28 874 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 KPNA3O00505 521 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-213ENST00000460211 BCAT2O15382 392 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-213ENST00000460211 ERCC2P18074 760 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 CSRP1P21291 193 aaKnown RBP15.22■□□□□ 0.03
ATG4B-213ENST00000460211 SNRPD1P62314 119 aaKnown RBP15.22■□□□□ 0.03
ATG4B-213ENST00000460211 DPYSL2Q16555 572 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 KIAA0895LQ68EN5 471 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 DPY19L3Q6ZPD9 716 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 RYBPQ8N488 228 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-213ENST00000460211 AADATQ8N5Z0 425 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 LZTR1Q8N653 840 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 GATA6Q92908 595 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 HMCESQ96FZ2 354 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 HEPHQ9BQS7 1158 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 KDM4CQ9H3R0 1056 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 NOL6Q9H6R4 1146 aaKnown RBP15.22■□□□□ 0.03
ATG4B-213ENST00000460211 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.22■□□□□ 0.03
ATG4B-213ENST00000460211 SERGEFQ9UGK8 458 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 EIF2B4Q9UI10 523 aaKnown RBP15.22■□□□□ 0.03
ATG4B-213ENST00000460211 FCF1Q9Y324 198 aaKnown RBP15.22■□□□□ 0.03
ATG4B-213ENST00000460211 ZFYVE26Q68DK2 2539 aa15.22■□□□□ 0.03
ATG4B-213ENST00000460211 TBC1D3DA0A087WVF3 549 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 TBC1D3IA0A087WXS9 549 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 TBC1D3EA0A087X179 549 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 TBC1D3KA0A087X1G2 549 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 TBC1D3FA6NER0 549 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-213ENST00000460211 TBC1D3LB9A6J9 549 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 HYAL3O43820 417 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-213ENST00000460211 PROSCO94903 275 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 TBC1D3HP0C7X1 549 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 RARAP10276 462 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 CD27P26842 260 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 IL1R2P27930 398 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 RAD51Q06609 339 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 SERINC3Q13530 473 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 KRT81Q14533 505 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 TEAD4Q15561 434 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 SMTNL2Q2TAL5 461 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 INO80DQ53TQ3 878 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-213ENST00000460211 ARSIQ5FYB1 569 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 KCNT1Q5JUK3 1230 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 TBC1D3GQ6DHY5 549 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 TBC1D3CQ6IPX1 549 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 NCEH1Q6PIU2 408 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 CYP4V2Q6ZWL3 525 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-213ENST00000460211 RHOT2Q8IXI1 618 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 TBC1D3Q8IZP1 549 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-213ENST00000460211 ZCCHC14Q8WYQ9 949 aaKnown RBP15.21■□□□□ 0.03
ATG4B-213ENST00000460211 BIRC7Q96CA5 298 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 PACSIN1Q9BY11 444 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 ZDHHC5Q9C0B5 715 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 LUC7LQ9NQ29 371 aaKnown RBP15.21■□□□□ 0.03
ATG4B-213ENST00000460211 SPTLC3Q9NUV7 552 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 CWC15Q9P013 229 aaKnown RBP15.21■□□□□ 0.03
ATG4B-213ENST00000460211 HECAQ9UBI9 543 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-213ENST00000460211 SARDHQ9UL12 918 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 INTUQ9ULD6 942 aa15.21■□□□□ 0.03
ATG4B-213ENST00000460211 ASCC3Q8N3C0 2202 aaKnown RBP15.21■□□□□ 0.03
ATG4B-213ENST00000460211 TNRC6BQ9UPQ9 1833 aaKnown RBP15.2■□□□□ 0.02
ATG4B-213ENST00000460211 ADAMTS9Q9P2N4 1935 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 SRRM3A6NNA2 597 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-213ENST00000460211 POP4O95707 220 aaKnown RBP15.2■□□□□ 0.02
ATG4B-213ENST00000460211 GSRP00390 522 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 KRT7P08729 469 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 ENGP17813 658 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 DRD3P35462 400 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 CCR5P51681 352 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 CCNHP51946 323 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-213ENST00000460211 ADPRHP54922 357 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 CNTN1Q12860 1018 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 POM121L1PQ3SYA9 428 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 LEKR1Q6ZMV7 388 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 GAS2L3Q86XJ1 694 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 CCDC170Q8IYT3 715 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 ZCCHC9Q8N567 271 aaKnown RBP15.2■□□□□ 0.02
ATG4B-213ENST00000460211 TC2NQ8N9U0 490 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 CHST14Q8NCH0 376 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 OR2AP1Q8NGE2 309 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 GRIN3AQ8TCU5 1115 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 SKA1Q96BD8 255 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 CELF6Q96J87 481 aaKnown RBP15.2■□□□□ 0.02
ATG4B-213ENST00000460211 LRIG1Q96JA1 1093 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 GTPBP2Q9BX10 602 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms