RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 FAM46CQ5VWP2 391 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 TMEM92Q6UXU6 159 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 RASSF3Q86WH2 238 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 CDKL3Q8IVW4 592 aaPredicted RBP14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 C17orf53Q8N3J3 647 aaPredicted RBP14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 NETO2Q8NC67 525 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 TMIEQ8NEW7 156 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 OR2A12Q8NGT7 310 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 ACTRT1Q8TDG2 376 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 QKIQ96PU8 341 aaKnown RBP eCLIP14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 LGMNQ99538 433 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 ZDHHC4Q9NPG8 344 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 SAE1Q9UBE0 346 aaPredicted RBP14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 RNF14Q9UBS8 474 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 SCML1Q9UN30 329 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 FCF1Q9Y324 198 aaKnown RBP14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 SAR1BQ9Y6B6 198 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 TCRBV21S2A2A0A5A6 115 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 BCLAF3A2AJT9 711 aaKnown RBP14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 CFAP69A5D8W1 941 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 K7ESF4 209 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 PRNPP04156 253 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 COL9A1P20849 921 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 CXCR5P32302 372 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 EIF3EP60228 445 aaKnown RBP14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 AP1S1P61966 158 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 SLC10A7Q0GE19 358 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 AP1B1Q10567 949 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 LONRF2Q1L5Z9 754 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 ZNF776Q68DI1 518 aaPredicted RBP14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 KIAA1211LQ6NV74 962 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 DRICH1Q6PGQ1 229 aaPredicted RBP14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 DPY19L3Q6ZPD9 716 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 Q6ZVU0 165 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 ZSCAN30Q86W11 494 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 TMPRSS6Q8IU80 811 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 NKD2Q969F2 451 aaPredicted RBP14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 TUBGCP5Q96RT8 1024 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 FAM129BQ96TA1 746 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 IL12RB2Q99665 862 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 MGME1Q9BQP7 344 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 HEPHQ9BQS7 1158 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 CPEB1Q9BZB8 566 aaKnown RBP14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 PPM1HQ9ULR3 514 aa14.53□□□□□ -0.08
HMGXB4-204ENST00000455359 C1QTNF3-AMACRE9PGA6 284 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 H7C0C1 242 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 PGRMC1O00264 195 aaKnown RBP14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 STK10O94804 968 aaKnown RBP14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 MAP3K6O95382 1288 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 ADH1BP00325 375 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 RBP3P10745 1247 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 TDGF1P13385 188 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 CASQ1P31415 396 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 STIP1P31948 543 aaKnown RBP14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 CHRNA3P32297 505 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 ATP5OP48047 213 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 NUMBP49757 651 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 COPAP53621 1224 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 CCDC15Q0P6D6 951 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 BYSLQ13895 437 aaKnown RBP14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 CCNG2Q16589 344 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 MYLK3Q32MK0 819 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 ALG1LQ6GMV1 187 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 LEKR1Q6ZMV7 388 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 ZC3H18Q86VM9 953 aaKnown RBP14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 ZNF366Q8N895 744 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 SLC35B2Q8TB61 432 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 HCAR2Q8TDS4 363 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 HTR3CQ8WXA8 447 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 PRCCQ92733 491 aaPredicted RBP14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 MRGPRX1Q96LB2 322 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 OSBPL1AQ9BXW6 950 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 POLR1EQ9GZS1 481 aaKnown RBP14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 KCNH6Q9H252 994 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 TNKS2Q9H2K2 1166 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 RBM22Q9NW64 420 aaKnown RBP eCLIP14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 C2orf42Q9NWW7 574 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 HECAQ9UBI9 543 aaPredicted RBP14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 LHX3Q9UBR4 397 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 TRHDEQ9UKU6 1024 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 ACTL7AQ9Y615 435 aa14.52□□□□□ -0.08
HMGXB4-204ENST00000455359 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 TCRBV7S2A1N4TA0A589 114 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 ZNF217O75362 1048 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 NEBLO76041 1014 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 JCHAINP01591 159 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 VAV1P15498 845 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 GABRG2P18507 467 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 CCNHP51946 323 aaPredicted RBP14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 TEX44Q53QW1 395 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 HEATR6Q6AI08 1181 aaKnown RBP14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 USP30Q70CQ3 517 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 MAML2Q8IZL2 1156 aaPredicted RBP14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 STK40Q8N2I9 435 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 TSEN2Q8NCE0 465 aaKnown RBP14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 COG1Q8WTW3 980 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 NELL1Q92832 810 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 SIPA1Q96FS4 1042 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 ZNF641Q96N77 438 aaPredicted RBP14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 HHIPQ96QV1 700 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms