RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 PHTF2Q8N3S3 785 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 ATPAF2Q8N5M1 289 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 C2CD4AQ8NCU7 369 aaPredicted RBP12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 PPHLN1Q8NEY8 458 aaKnown RBP12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 PPP1R13LQ8WUF5 828 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 MAELQ96JY0 434 aaKnown RBP12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 C1orf74Q96LT6 269 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 TRAPPC9Q96Q05 1148 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 CAB39LQ9H9S4 337 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 ATP13A1Q9HD20 1204 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 TBC1D13Q9NVG8 400 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 POMPQ9Y244 141 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 MEI4A8MW99 385 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 KCNU1A8MYU2 1149 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 DCXO43602 365 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 CHRNA1P02708 482 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 PAMP19021 973 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 ARNTP27540 789 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 PIK3R1P27986 724 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 CCR1P32246 355 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 RAB10P61026 200 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 POU4F1Q01851 419 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 CDC16Q13042 620 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 USP10Q14694 798 aaKnown RBP12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 CCL14Q16627 93 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 RALGPS1Q5JS13 557 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 MAP3K21Q5TCX8 1036 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 VWA5B1Q5TIE3 1220 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 SEL1L3Q68CR1 1132 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 C17orf99Q6UX52 265 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 C16orf89Q6UX73 402 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 OTOP3Q7RTS5 596 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 LSMEM2Q8N112 164 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 POU5F2Q8N7G0 328 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 ACVR1CQ8NER5 493 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 EDEM1Q92611 657 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 SUSD3Q96L08 255 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 HACD3Q9P035 362 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 STK39Q9UEW8 545 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 CPA4Q9UI42 421 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 SLC39A10Q9ULF5 831 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 ACOT9Q9Y305 439 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 SNX10Q9Y5X0 201 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 MYO16Q9Y6X6 1858 aa12.69□□□□□ -0.38
ECHDC1-209ENST00000454591 DOCK4Q8N1I0 1966 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 GOLGA8QA0A0J9YX86 632 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 GOLGA8OA6NCC3 632 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 GOLGA8NF8WBI6 632 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 PAPSS2O95340 614 aaPredicted RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 PGK1P00558 417 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 PDHA1P08559 390 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 HSPA1AP0DMV8 641 aaKnown RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 HSPA1BP0DMV9 641 aaKnown RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 TFEBP19484 476 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 NCF2P19878 526 aaPredicted RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 CDC25CP30307 473 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 AFF1P51825 1210 aaKnown RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 GALNT1Q10472 559 aaPredicted RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 TBL3Q12788 808 aaKnown RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 USP4Q13107 963 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 TUSC3Q13454 348 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 LSM12Q3MHD2 195 aaKnown RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 KDELC1Q6UW63 502 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 RNF111Q6ZNA4 994 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 ACAD11Q709F0 780 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 PIWIL4Q7Z3Z4 852 aaKnown RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 TMC7Q7Z402 723 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 PDSS2Q86YH6 399 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 DEFB107AQ8IZN7 70 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 FSTL5Q8N475 847 aaPredicted RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 RTL3Q8N8U3 475 aaKnown RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 GABPB2Q8TAK5 448 aaPredicted RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 UCMAQ8WVF2 138 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 PGLYRP2Q96PD5 576 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 BTBD9Q96Q07 612 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 OR52B2Q96RD2 323 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 SERPINI1Q99574 410 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 MRPL57Q9BQC6 102 aaKnown RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 OXCT2Q9BYC2 517 aaPredicted RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 FAM192AQ9GZU8 254 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 MRPL46Q9H2W6 279 aaKnown RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 TASP1Q9H6P5 420 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 ZNF408Q9H9D4 720 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 TIMM13Q9Y5L4 95 aaPredicted RBP12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 SQORQ9Y6N5 450 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 FRMPD3Q5JV73 1810 aa12.68□□□□□ -0.38
ECHDC1-209ENST00000454591 A0A0U1RQF3 1178 aa12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 FAM95CA0A1B0GW59 222 aa12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 MANSC4A6NHS7 340 aaPredicted RBP12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 TK2O00142 265 aa12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 DLX3O60479 287 aa12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 ABCB7O75027 752 aa12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 PAGE1O75459 146 aa12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 TADA2AO75478 443 aa12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 PIGNO95427 931 aa12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 PENKP01210 267 aaPredicted RBP12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 CAPNS1P04632 268 aa12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 STMN1P16949 149 aa12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 TPH1P17752 444 aa12.67□□□□□ -0.38
ECHDC1-209ENST00000454591 BDNFP23560 247 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms