RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 RFTN1Q14699 578 aaPredicted RBP28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 FAM46CQ5VWP2 391 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 PEX26Q7Z412 305 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 ATPAF2Q8N5M1 289 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 PIP4K2CQ8TBX8 421 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 TRAF3IP1Q8TDR0 691 aaPredicted RBP28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 RBM41Q96IZ5 413 aaKnown RBP28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 ZNF599Q96NL3 588 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 HEPHQ9BQS7 1158 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 HECAQ9UBI9 543 aaPredicted RBP28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 LHX3Q9UBR4 397 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 IL36AQ9UHA7 158 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 RAB23Q9ULC3 237 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 NUMA1Q14980 2115 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 TNRC6BQ9UPQ9 1833 aaKnown RBP28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 APOL1O14791 398 aa28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 MAP3K13O43283 966 aa28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 ZFXP17010 805 aaPredicted RBP28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 GARSP41250 739 aaKnown RBP28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 RHOAP61586 193 aa28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 SFSWAPQ12872 951 aaKnown RBP28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 TFDP3Q5H9I0 405 aa28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 PMS2CLQ68D20 193 aa28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 RFX6Q8HWS3 928 aa28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 AADATQ8N5Z0 425 aa28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 VOPP1Q96AW1 172 aa28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 TOE1Q96GM8 510 aaKnown RBP28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 ZNF830Q96NB3 372 aaPredicted RBP28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 LZTFL1Q9NQ48 299 aa28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 FBXL12Q9NXK8 326 aa28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 DTLQ9NZJ0 730 aa28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 WASF2Q9Y6W5 498 aa28.44■■■□□ 2.14
SMARCC1-203ENST00000454240 C1QTNF3-AMACRE9PGA6 284 aa28.43■■■□□ 2.14
SMARCC1-203ENST00000454240 RHOBTB1O94844 696 aa28.43■■■□□ 2.14
SMARCC1-203ENST00000454240 PRNPP04156 253 aa28.43■■■□□ 2.14
SMARCC1-203ENST00000454240 KRT10P13645 584 aa28.43■■■□□ 2.14
SMARCC1-203ENST00000454240 METAP1P53582 386 aa28.43■■■□□ 2.14
SMARCC1-203ENST00000454240 ELF2Q15723 593 aa28.43■■■□□ 2.14
SMARCC1-203ENST00000454240 LPAL2Q16609 132 aa28.43■■■□□ 2.14
SMARCC1-203ENST00000454240 ARSIQ5FYB1 569 aa28.43■■■□□ 2.14
SMARCC1-203ENST00000454240 SPDYCQ5MJ68 293 aa28.43■■■□□ 2.14
SMARCC1-203ENST00000454240 SERGEFQ9UGK8 458 aa28.43■■■□□ 2.14
SMARCC1-203ENST00000454240 NCKAP1Q9Y2A7 1128 aa28.43■■■□□ 2.14
SMARCC1-203ENST00000454240 A0A1W2PP55 124 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 PRR23AA6NEV1 266 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 RNF103O00237 685 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 MAP3K6O95382 1288 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 POP4O95707 220 aaKnown RBP28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 FTCDO95954 541 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 MX2P20592 715 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 DRD3P35462 400 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 PLA2G5P39877 138 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 RWDD2BP57060 319 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 COPS2P61201 443 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 TFDP2Q14188 446 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 LBRQ14739 615 aaKnown RBP28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 MYLK3Q32MK0 819 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 ATXN7L2Q5T6C5 722 aaPredicted RBP28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 TMCO4Q5TGY1 634 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 LAIR1Q6GTX8 287 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 LPCAT2Q7L5N7 544 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 ASCL5Q7RTU5 278 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 FAM124AQ86V42 546 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 HDDC3Q8N4P3 179 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 ALG3Q92685 438 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 FAM131CQ96AQ9 280 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 FAM122AQ96E09 287 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 GDAP1L1Q96MZ0 367 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 TSGA13Q96PP4 275 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 OMDQ99983 421 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 NEUROG2Q9H2A3 272 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 FZD4Q9ULV1 537 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 SDK1Q7Z5N4 2213 aa28.42■■■□□ 2.14
SMARCC1-203ENST00000454240 hCG_1818297A0A087WSY0 165 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 MIF4GDA9UHW6 222 aaKnown RBP28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 LEFTY1O75610 366 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 IGSF6O95976 241 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 ACSL1P33121 698 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 RPL6Q02878 288 aaKnown RBP28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 ADCY2Q08462 1091 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 SLC10A7Q0GE19 358 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 PPP2R5EQ16537 467 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 CCDC50Q8IVM0 306 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 TSEN2Q8NCE0 465 aaKnown RBP28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 OR6K2Q8NGY2 324 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 GRIN3AQ8TCU5 1115 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 UBE2Q2Q8WVN8 375 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 FATE1Q969F0 183 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 LRIG1Q96JA1 1093 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 LOXL4Q96JB6 756 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 BTBD1Q9H0C5 482 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 PACSIN2Q9UNF0 486 aaPredicted RBP28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 HEY1Q9Y5J3 304 aa28.41■■■□□ 2.14
SMARCC1-203ENST00000454240 ANKRD36A6QL64 1941 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 CST8O60676 142 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 NDUFS2O75306 463 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 RNASEH2AO75792 299 aaKnown RBP28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 CCNCP24863 283 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 NSUN2Q08J23 767 aaKnown RBP eCLIP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms