RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 TNPO3Q9Y5L0 923 aaKnown RBP12.19□□□□□ -0.46
SEC16A-207ENST00000453963 FAM25AB3EWG3 89 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 FAM25CB3EWG5 89 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 FAM25GB3EWG6 89 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 RNASEH1O60930 286 aaKnown RBP12.18□□□□□ -0.46
SEC16A-207ENST00000453963 DARSP14868 501 aaKnown RBP12.18□□□□□ -0.46
SEC16A-207ENST00000453963 S100A3P33764 101 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 PIK3CGP48736 1102 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 CLCN5P51795 746 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 CASP12Q6UXS9 341 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 C12orf50Q8NA57 414 aaPredicted RBP12.18□□□□□ -0.46
SEC16A-207ENST00000453963 EDEM1Q92611 657 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 WNT8BQ93098 351 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 DEPDC7Q96QD5 511 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 REEP1Q9H902 201 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 C8orf4Q9NR00 106 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 MAN1C1Q9NR34 630 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 USP20Q9Y2K6 914 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 RIC1Q4ADV7 1423 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 TSC22D2O75157 780 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 SEC24AO95486 1093 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 CALCAP01258 141 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 CENPAP49450 140 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 FAM187BQ17R55 369 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 INSCQ1MX18 579 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 OVOS1Q6IE37 1185 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 ZNF554Q86TJ5 538 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 TDRPQ86YL5 185 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 SLC2A14Q8TDB8 520 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 TEKT5Q96M29 485 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 HBS1LQ9Y450 684 aaKnown RBP12.18□□□□□ -0.46
SEC16A-207ENST00000453963 DHRS12A0PJE2 317 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 EFCAB10A6NFE3 127 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 SMIM22K7EJ46 135 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 TUBP50607 506 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 SCNN1BP51168 640 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 DGCR6Q14129 220 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 PHKG1Q16816 387 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 ARSHQ5FYA8 562 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 ARMC3Q5W041 872 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 IQSEC1Q6DN90 963 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 PACS1Q6VY07 963 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 DNAJC14Q6Y2X3 702 aaPredicted RBP12.18□□□□□ -0.46
SEC16A-207ENST00000453963 CCDC80Q76M96 950 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 HSFY1Q96LI6 401 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 PCDHB18PQ96TA0 734 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 TMEM191CA6NGB0 347 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 BTN3A1O00481 513 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 KCNH1O95259 989 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 CDH3P22223 829 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 CYP2C18P33260 490 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 CRHR1P34998 444 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 ABCG1P45844 678 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 CCNHP51946 323 aaPredicted RBP12.18□□□□□ -0.46
SEC16A-207ENST00000453963 TRIM71Q2Q1W2 868 aaKnown RBP12.18□□□□□ -0.46
SEC16A-207ENST00000453963 C10orf53Q8N6V4 93 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 STARD8Q92502 1023 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 CDK5RAP1Q96SZ6 601 aaKnown RBP12.18□□□□□ -0.46
SEC16A-207ENST00000453963 TSEN34Q9BSV6 310 aaKnown RBP12.18□□□□□ -0.46
SEC16A-207ENST00000453963 MECRQ9BV79 373 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 RAB26Q9ULW5 256 aa12.18□□□□□ -0.46
SEC16A-207ENST00000453963 H3BNX3 289 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 GSTM1P09488 218 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 EPHA3P29320 983 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 CRADDP78560 199 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 MFSD10Q14728 455 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 GPR107Q5VW38 600 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 METTL21CQ5VZV1 264 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 RINLQ6ZS11 566 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 CCDC149Q6ZUS6 474 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 C11orf74Q86VG3 221 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 C10orf107Q8IVU9 208 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 ARHGEF28Q8N1W1 1705 aaKnown RBP12.17□□□□□ -0.46
SEC16A-207ENST00000453963 MRPL48Q96GC5 212 aaKnown RBP12.17□□□□□ -0.46
SEC16A-207ENST00000453963 ARHGEF3Q9NR81 526 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 UBA2Q9UBT2 640 aaPredicted RBP12.17□□□□□ -0.46
SEC16A-207ENST00000453963 CHKBQ9Y259 395 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 SQORQ9Y6N5 450 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 CBX4O00257 560 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 TAF4O00268 1085 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 PIAS1O75925 651 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 ENDOD1O94919 500 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 POMCP01189 267 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 HOXC6P09630 235 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 PTP4A2Q12974 167 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 KLF10Q13118 480 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 ZNF846Q147U1 533 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 AMIGO2Q86SJ2 522 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 HERC6Q8IVU3 1022 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 NKD2Q969F2 451 aaPredicted RBP12.17□□□□□ -0.46
SEC16A-207ENST00000453963 MARK4Q96L34 752 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 SERPINB11Q96P15 392 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 BTBD9Q96Q07 612 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 SERHL2Q9H4I8 314 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 FBXO44Q9H4M3 255 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 PTPRHQ9HD43 1115 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 SERHLQ9NQF3 203 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 SNX15Q9NRS6 342 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 MROH2AA6NES4 1674 aa12.17□□□□□ -0.46
SEC16A-207ENST00000453963 ALOX5P09917 674 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms