RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 MGARPQ8TDB4 240 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 TGS1Q96RS0 853 aaKnown RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 EPAS1Q99814 870 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 SELENOSQ9BQE4 189 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 APOL2Q9BQE5 337 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 ZYG11BQ9C0D3 744 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 GKN1Q9NS71 199 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 IKZF3Q9UKT9 509 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 SMG5Q9UPR3 1016 aaKnown RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 C2orf71A6NGG8 1288 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 CAPN14A8MX76 684 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 TRIM49D1C9J1S8 452 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 MYO1CO00159 1063 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 CAPN9O14815 690 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 RTN3O95197 1032 aaPredicted RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 ZWINTO95229 277 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 PRAMEF12O95522 483 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 AHSGP02765 367 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 TPH1P17752 444 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 TACR2P21452 398 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 LIMK2P53671 638 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 EPHA5P54756 1037 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 SLC8A3P57103 927 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 DSC2Q02487 901 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 USP41Q3LFD5 358 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 TTC39BQ5VTQ0 682 aaPredicted RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 ZNF549Q6P9A3 640 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 ARHGEF18Q6ZSZ5 1173 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 TFAP2DQ7Z6R9 452 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 SCN4BQ8IWT1 228 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 ARFGAP2Q8N6H7 521 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 GPR22Q99680 433 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 VPS11Q9H270 941 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 ALG13Q9NP73 1137 aaKnown RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 SENP1Q9P0U3 644 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 LHX3Q9UBR4 397 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 MTO1Q9Y2Z2 717 aaKnown RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 TGM5O43548 720 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 ACRP10323 421 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 NUMBP49757 651 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 ZFYVE27Q5T4F4 411 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 ASTLQ6HA08 431 aaPredicted RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 ESRP1Q6NXG1 681 aaKnown RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 C2CD4AQ8NCU7 369 aaPredicted RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 FBXO32Q969P5 355 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 MARCH2Q9P0N8 246 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 IRAK3Q9Y616 596 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 ABHD14A-ACY1A0A1B0GW23 586 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 ARHGAP42A6NI28 874 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 ERI2A8K979 691 aaKnown RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 NDUFAB1O14561 156 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 CNPP09543 421 aaKnown RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 ERVFC1P60507 584 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 NCALDP61601 193 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 RPS24P62847 133 aaKnown RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 ACTN3Q08043 901 aaPredicted RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 CCDC15Q0P6D6 951 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 IFRD2Q12894 506 aaPredicted RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 HNRNPDQ14103 355 aaKnown RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 PRSS36Q5K4E3 855 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 SPANXN3Q5MJ09 141 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 RABGAP1LQ5R372 815 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 CMC1Q7Z7K0 106 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 GALNT7Q86SF2 657 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 ZSWIM9Q86XI8 627 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 DENND6AQ8IWF6 608 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 LSMEM2Q8N112 164 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 CFAP52Q8N1V2 620 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 SHKBP1Q8TBC3 707 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 PTCD3Q96EY7 689 aaKnown RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 CYP2S1Q96SQ9 504 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 OLFM1Q99784 485 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 SIK2Q9H0K1 926 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 ZNF385DQ9H6B1 395 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 C11orf49Q9H6J7 331 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 HAO1Q9UJM8 370 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 HBS1LQ9Y450 684 aaKnown RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 SPO11Q9Y5K1 396 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 ZFP37Q9Y6Q3 630 aaPredicted RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 HIDE1A8MVS5 230 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 TRAFD1O14545 582 aaPredicted RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 IVLP07476 585 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 IBSPP21815 317 aaPredicted RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 CLCN4P51793 760 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 SESN2P58004 480 aaPredicted RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 MAXP61244 160 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 NSUN2Q08J23 767 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP46-202ENST00000451218 SLC5A9Q2M3M2 681 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 SIRPB2Q5JXA9 342 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 TMEM240Q5SV17 173 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 FAM91A1Q658Y4 838 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 FBXO46Q6PJ61 603 aaPredicted RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 CEP128Q6ZU80 1094 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 TAOK1Q7L7X3 1001 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 ANKRD42Q8N9B4 389 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 MDGA1Q8NFP4 955 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 LRRC3BQ96PB8 259 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 SEPT5Q99719 369 aaPredicted RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 TBL1YQ9BQ87 522 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 SLC25A51Q9H1U9 297 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms