RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 H7C0C1 242 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 KIF2AO00139 706 aaPredicted RBP9.35□□□□□ -0.91
RFX3-207ENST00000449190 SNAP91O60641 907 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 PRAMEF11O60813 436 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 ZNF217O75362 1048 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 ZNF189O75820 626 aaPredicted RBP9.35□□□□□ -0.91
RFX3-207ENST00000449190 EPN2O95208 641 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 TCP1P17987 556 aaKnown RBP9.35□□□□□ -0.91
RFX3-207ENST00000449190 SDHBP21912 280 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 IL12RB1P42701 662 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 CTSOP43234 321 aaPredicted RBP9.35□□□□□ -0.91
RFX3-207ENST00000449190 RECQLP46063 649 aaPredicted RBP9.35□□□□□ -0.91
RFX3-207ENST00000449190 ATP5OP48047 213 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 NUMBP49757 651 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 ETF1P62495 437 aaKnown RBP9.35□□□□□ -0.91
RFX3-207ENST00000449190 ARHGAP8P85298 464 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 GBE1Q04446 702 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 IL10RBQ08334 325 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 SPEM2Q0P670 501 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 ZNF234Q14588 700 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 RFTN1Q14699 578 aaPredicted RBP9.35□□□□□ -0.91
RFX3-207ENST00000449190 CSRP2Q16527 193 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 LONRF2Q1L5Z9 754 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 MAP7D1Q3KQU3 841 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 SPDYCQ5MJ68 293 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 AFMIDQ63HM1 303 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 KIAA1211LQ6NV74 962 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 SLC36A4Q6YBV0 504 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 ARHGAP12Q8IWW6 846 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 OR52K2Q8NGK3 314 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 SORCS1Q8WY21 1168 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 HAUS1Q96CS2 278 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 RPL10LQ96L21 214 aaKnown RBP9.35□□□□□ -0.91
RFX3-207ENST00000449190 ZNF599Q96NL3 588 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 FRMD8P1Q9BZ68 369 aaPredicted RBP9.35□□□□□ -0.91
RFX3-207ENST00000449190 KLC2Q9H0B6 622 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 NOL6Q9H6R4 1146 aaKnown RBP9.35□□□□□ -0.91
RFX3-207ENST00000449190 UBA2Q9UBT2 640 aaPredicted RBP9.35□□□□□ -0.91
RFX3-207ENST00000449190 INVSQ9Y283 1065 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 VPS9D1Q9Y2B5 631 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 MFHAS1Q9Y4C4 1052 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 FAM186AA6NE01 2351 aa9.35□□□□□ -0.91
RFX3-207ENST00000449190 RIF1Q5UIP0 2472 aaKnown RBP9.34□□□□□ -0.91
RFX3-207ENST00000449190 TARSL2A2RTX5 802 aaKnown RBP9.34□□□□□ -0.91
RFX3-207ENST00000449190 HACD1B0YJ81 288 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 APOC4-APOC2K7ER74 178 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 CES2O00748 559 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 MCF2LO15068 1137 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 MFSD11O43934 449 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 RNASEH1O60930 286 aaKnown RBP9.34□□□□□ -0.91
RFX3-207ENST00000449190 ZMPSTE24O75844 475 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 APOC2P02655 101 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 ATP1A1P05023 1023 aaKnown RBP9.34□□□□□ -0.91
RFX3-207ENST00000449190 EPHX1P07099 455 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 ZNF806P0C7X5 589 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 CCNCP24863 283 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 CXCR5P32302 372 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 GARSP41250 739 aaKnown RBP9.34□□□□□ -0.91
RFX3-207ENST00000449190 RENBPP51606 427 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 ZNF33AQ06730 810 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 GALNT2Q10471 571 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 AP1B1Q10567 949 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 DLG2Q15700 870 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 INO80DQ53TQ3 878 aaPredicted RBP9.34□□□□□ -0.91
RFX3-207ENST00000449190 MARC1Q5VT66 337 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 PMS2CLQ68D20 193 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 AADACL2Q6P093 401 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 DARS2Q6PI48 645 aaKnown RBP9.34□□□□□ -0.91
RFX3-207ENST00000449190 NPNTQ6UXI9 565 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 LINGO4Q6UY18 593 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 LEKR1Q6ZMV7 388 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 LPCAT2Q7L5N7 544 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 ZSCAN30Q86W11 494 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 SLC13A5Q86YT5 568 aaPredicted RBP9.34□□□□□ -0.91
RFX3-207ENST00000449190 CCDC13Q8IYE1 715 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 SH2D3CQ8N5H7 860 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 NPWQ8N729 165 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 NETO2Q8NC67 525 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 TFB1MQ8WVM0 346 aaKnown RBP9.34□□□□□ -0.91
RFX3-207ENST00000449190 RLN3Q8WXF3 142 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 SPACA7Q96KW9 195 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 MRGPRX1Q96LB2 322 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 TSGA13Q96PP4 275 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 OSBPL9Q96SU4 736 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 CINPQ9BW66 212 aaPredicted RBP9.34□□□□□ -0.91
RFX3-207ENST00000449190 CEP44Q9C0F1 390 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 ARRDC1-AS1Q9H2J1 176 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 TMEM245Q9H330 911 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 PARD6AQ9NPB6 346 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 ITM2CQ9NQX7 267 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 HOMER3Q9NSC5 361 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 SEMA4GQ9NTN9 838 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 DTLQ9NZJ0 730 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 SEPT3Q9UH03 358 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 SLCO3A1Q9UIG8 710 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 SNX12Q9UMY4 172 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 HS3ST2Q9Y278 367 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 SAR1BQ9Y6B6 198 aa9.34□□□□□ -0.91
RFX3-207ENST00000449190 ZFHX2Q9C0A1 2572 aaPredicted RBP9.34□□□□□ -0.91
RFX3-207ENST00000449190 EDDM13A0A1B0GTR0 161 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms