RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 RFTN1Q14699 578 aaPredicted RBP14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 PAFAH1B3Q15102 231 aaKnown RBP14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 SPDYCQ5MJ68 293 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 PMS2CLQ68D20 193 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 NCBP2-AS2Q69YL0 99 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 CCDC50Q8IVM0 306 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 RCOR2Q8IZ40 523 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 BBS5Q8N3I7 341 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 HDDC3Q8N4P3 179 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 RNF10Q8N5U6 811 aaKnown RBP14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 CHST14Q8NCH0 376 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 TMIEQ8NEW7 156 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 OR2AP1Q8NGE2 309 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 GRIN3AQ8TCU5 1115 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 RUBCNQ92622 972 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 PPP1R16AQ96I34 528 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 RBM41Q96IZ5 413 aaKnown RBP14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 GDAP1L1Q96MZ0 367 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 CINPQ9BW66 212 aaPredicted RBP14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 ZDHHC6Q9H6R6 413 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 SGK2Q9HBY8 427 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 WSB2Q9NYS7 404 aaPredicted RBP14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 AMFRQ9UKV5 643 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 PPM1HQ9ULR3 514 aa14.26□□□□□ -0.13
GTF3C3-206ENST00000448539 DMXL1Q9Y485 3027 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 CCDC66A2RUB6 948 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 GRID2IPA4D2P6 1211 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 KPNA3O00505 521 aaPredicted RBP14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 KRIT1O00522 736 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 APOL1O14791 398 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 MFSD11O43934 449 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 ZNF821O75541 412 aaPredicted RBP14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 POP4O95707 220 aaKnown RBP14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 C7P10643 843 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 MX2P20592 715 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 CETN2P41208 172 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 CCZ1BP86790 482 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 CCZ1P86791 482 aaPredicted RBP14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 CREB5Q02930 508 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 TFDP2Q14188 446 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 POM121L1PQ3SYA9 428 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 ARSIQ5FYB1 569 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 SYCP2LQ5T4T6 812 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 TMCO4Q5TGY1 634 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 ARHGAP36Q6ZRI8 547 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 PEX26Q7Z412 305 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 CYP2U1Q7Z449 544 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 TP53INP2Q8IXH6 220 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 KATNAL2Q8IYT4 538 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 DEFB119Q8N690 84 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 PQLC3Q8N755 202 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 FOXJ1Q92949 421 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 ZNF599Q96NL3 588 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 GPR174Q9BXC1 333 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 NEUROG2Q9H2A3 272 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 PDFQ9HBH1 243 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 SEPT3Q9UH03 358 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 FZD4Q9ULV1 537 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 GUCA1BQ9UMX6 200 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 ZNF292O60281 2723 aa14.25□□□□□ -0.13
GTF3C3-206ENST00000448539 A0A0U1RQJ8 604 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 FAM47DPA6NHR8 397 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 C3orf70A6NLC5 250 aaPredicted RBP14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 MEI4A8MW99 385 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 LEFTY1O75610 366 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 NEBLO76041 1014 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 EPN2O95208 641 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 SEMA4FO95754 770 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 CTSLP07711 333 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 CTNNA1P35221 906 aaKnown RBP14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 DPP6P42658 865 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 RENBPP51606 427 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 RWDD2BP57060 319 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 ZNF33AQ06730 810 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 ZNF235Q14590 738 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 LBRQ14739 615 aaKnown RBP14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 CYTH1Q15438 398 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 MYLK3Q32MK0 819 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 ATXN7L2Q5T6C5 722 aaPredicted RBP14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 LYSMD4Q5XG99 296 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 KAZNQ674X7 775 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 TIGD7Q6NT04 549 aaPredicted RBP14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 MFSD7Q6UXD7 560 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 SPOCD1Q6ZMY3 1216 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 ARMCX6Q7L4S7 300 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 AADATQ8N5Z0 425 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 UBL4BQ8N7F7 174 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 LRRC57Q8N9N7 239 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 OR6K2Q8NGY2 324 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 EXD1Q8NHP7 514 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 KRT35Q92764 455 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 LRIG1Q96JA1 1093 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 HAUS2Q9NVX0 235 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 SARDHQ9UL12 918 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 PCDHGA5Q9Y5G8 931 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 PCDHA3Q9Y5H8 950 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 HEY1Q9Y5J3 304 aa14.24□□□□□ -0.13
GTF3C3-206ENST00000448539 LRRC72A6NJI9 287 aa14.23□□□□□ -0.13
GTF3C3-206ENST00000448539 SLC7A4O43246 635 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms