RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 BUB1O43683 1085 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 TMCC1O94876 653 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 SYPP08247 313 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 RARAP10276 462 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 ERCC2P18074 760 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 GKP32189 559 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 CSNK1EP49674 416 aaKnown RBP19.12■□□□□ 0.65
HDAC4-203ENST00000445704 CCR5P51681 352 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 ATXN3P54252 364 aaPredicted RBP19.12■□□□□ 0.65
HDAC4-203ENST00000445704 GEMIN4P57678 1058 aaKnown RBP19.12■□□□□ 0.65
HDAC4-203ENST00000445704 SLC25A11Q02978 314 aaKnown RBP19.12■□□□□ 0.65
HDAC4-203ENST00000445704 DPYSQ14117 519 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 PPM1JQ5JR12 505 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 NPWQ8N729 165 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 ZNF564Q8TBZ8 553 aaPredicted RBP19.12■□□□□ 0.65
HDAC4-203ENST00000445704 HSPH1Q92598 858 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 HEPHQ9BQS7 1158 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 DEF6Q9H4E7 631 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 OSGEPQ9NPF4 335 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 SPTLC3Q9NUV7 552 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 ZNHIT6Q9NWK9 470 aaKnown RBP19.12■□□□□ 0.65
HDAC4-203ENST00000445704 TBC1D3DA0A087WVF3 549 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 TBC1D3IA0A087WXS9 549 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 TBC1D3EA0A087X179 549 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 TBC1D3KA0A087X1G2 549 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 TBC1D3FA6NER0 549 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-203ENST00000445704 ZSCAN5CA6NGD5 496 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-203ENST00000445704 TBC1D3LB9A6J9 549 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 WNT9AO14904 365 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 AKR1B10O60218 316 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 GJB3O75712 270 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 TBC1D3HP0C7X1 549 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 NDST2P52849 883 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 DPYSL2Q16555 572 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 ATXN7L2Q5T6C5 722 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-203ENST00000445704 AFMIDQ63HM1 303 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 TBC1D3GQ6DHY5 549 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 TBC1D3CQ6IPX1 549 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 GAS2L3Q86XJ1 694 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 ARHGAP12Q8IWW6 846 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 PLPP6Q8IY26 295 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 TBC1D3Q8IZP1 549 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-203ENST00000445704 OR2AP1Q8NGE2 309 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 SLC6A18Q96N87 628 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 SLC39A8Q9C0K1 460 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 KDM4CQ9H3R0 1056 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 ZDHHC6Q9H6R6 413 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 NHEJ1Q9H9Q4 299 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-203ENST00000445704 IL21RQ9HBE5 538 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 PDFQ9HBH1 243 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.11■□□□□ 0.65
HDAC4-203ENST00000445704 CTTNBP2NLQ9P2B4 639 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 HECAQ9UBI9 543 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-203ENST00000445704 MFHAS1Q9Y4C4 1052 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 CACNA1EQ15878 2313 aa19.11■□□□□ 0.65
HDAC4-203ENST00000445704 AKR1B15C9JRZ8 316 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-203ENST00000445704 J3KR12 359 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 MYO1FO00160 1098 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 DAPK3O43293 454 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 LATO43561 262 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 GSRP00390 522 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 H2AFZP0C0S5 128 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 KCNA4P22459 653 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 HCAR3P49019 387 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 PAPOLAP51003 745 aaKnown RBP19.1■□□□□ 0.65
HDAC4-203ENST00000445704 AFF3P51826 1226 aaKnown RBP19.1■□□□□ 0.65
HDAC4-203ENST00000445704 TSR1Q2NL82 804 aaKnown RBP19.1■□□□□ 0.65
HDAC4-203ENST00000445704 BOLA3Q53S33 107 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 H2AFVQ71UI9 128 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 CNGA4Q8IV77 575 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 TP53INP2Q8IXH6 220 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 RYBPQ8N488 228 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-203ENST00000445704 CTNNBL1Q8WYA6 563 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-203ENST00000445704 ZDHHC5Q9C0B5 715 aa19.1■□□□□ 0.65
HDAC4-203ENST00000445704 DNAAF2Q9NVR5 837 aaKnown RBP19.1■□□□□ 0.65
HDAC4-203ENST00000445704 H3BRJ5 948 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 GIPC1O14908 333 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 OPHN1O60890 802 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 WNT1P04628 370 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 TMEM253P0C7T8 217 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 MAT2AP31153 395 aaKnown RBP19.09■□□□□ 0.65
HDAC4-203ENST00000445704 GRIA4P48058 902 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 CYTH1Q15438 398 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 KIF19Q2TAC6 998 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 INO80DQ53TQ3 878 aaPredicted RBP19.09■□□□□ 0.65
HDAC4-203ENST00000445704 ARHGAP36Q6ZRI8 547 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 ERN2Q76MJ5 926 aaKnown RBP19.09■□□□□ 0.65
HDAC4-203ENST00000445704 PARS2Q7L3T8 475 aaKnown RBP19.09■□□□□ 0.65
HDAC4-203ENST00000445704 POLNQ7Z5Q5 900 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 TC2NQ8N9U0 490 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 TEKT4Q8WW24 435 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 CCDC42Q96M95 316 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 CSPG4P5Q96PW8 444 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 HDAC8Q9BY41 377 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 PCDH18Q9HCL0 1135 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 DYRK4Q9NR20 520 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 ETNK2Q9NVF9 386 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 UVRAGQ9P2Y5 699 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 LHX3Q9UBR4 397 aa19.09■□□□□ 0.65
HDAC4-203ENST00000445704 SNX11Q9Y5W9 270 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms