RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 ECHS1P30084 290 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 CD68P34810 354 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-217ENST00000441756 NNMTP40261 264 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 MAPK8P45983 427 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 SERPINH1P50454 418 aaKnown RBP16.16■□□□□ 0.18
MCF2L-217ENST00000441756 MPP3Q13368 585 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 EIF4HQ15056 248 aaKnown RBP16.16■□□□□ 0.18
MCF2L-217ENST00000441756 HIF1AQ16665 826 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 ALG1LQ6GMV1 187 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 NAPEPLDQ6IQ20 393 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 CENPUQ71F23 418 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 LINC00523Q86TU6 105 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 ETFBKMTQ8IXQ9 262 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 GSPT2Q8IYD1 628 aaKnown RBP16.16■□□□□ 0.18
MCF2L-217ENST00000441756 NAT16Q8N8M0 369 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 ANKRD7Q92527 254 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 MGME1Q9BQP7 344 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 TIMM44O43615 452 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 TULP3O75386 442 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 MLNP12872 115 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 CA4P22748 312 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 SP100P23497 879 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-217ENST00000441756 RHOAP61586 193 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 ECT2LQ008S8 904 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 KCTD19Q17RG1 926 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-217ENST00000441756 DNAJC21Q5F1R6 531 aaKnown RBP16.15■□□□□ 0.18
MCF2L-217ENST00000441756 MBLAC2Q68D91 279 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 FBXO38Q6PIJ6 1188 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 LEKR1Q6ZMV7 388 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 SUGP1Q8IWZ8 645 aaKnown RBP16.15■□□□□ 0.18
MCF2L-217ENST00000441756 KLHDC8BQ8IXV7 354 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 TTC17Q96AE7 1141 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 ISG20Q96AZ6 181 aaKnown RBP16.15■□□□□ 0.18
MCF2L-217ENST00000441756 IMP4Q96G21 291 aaKnown RBP16.15■□□□□ 0.18
MCF2L-217ENST00000441756 FSD1LQ9BXM9 530 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 CEP44Q9C0F1 390 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 NEUROG2Q9H2A3 272 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 FAM153AQ9UHL3 310 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 INTS6Q9UL03 887 aaKnown RBP16.15■□□□□ 0.18
MCF2L-217ENST00000441756 HS3ST2Q9Y278 367 aa16.15■□□□□ 0.18
MCF2L-217ENST00000441756 TMEM63AO94886 807 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 SUN1O94901 812 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 SERPINF2P08697 491 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 GJA4P35212 333 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 VASPP50552 380 aaPredicted RBP16.14■□□□□ 0.17
MCF2L-217ENST00000441756 NSUN2Q08J23 767 aaKnown RBP eCLIP16.14■□□□□ 0.17
MCF2L-217ENST00000441756 ANKRD22Q5VYY1 191 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 ASTLQ6HA08 431 aaPredicted RBP16.14■□□□□ 0.17
MCF2L-217ENST00000441756 PTCRAQ6ISU1 281 aaPredicted RBP16.14■□□□□ 0.17
MCF2L-217ENST00000441756 LINGO4Q6UY18 593 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 CCDC25Q86WR0 208 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 PDCD7Q8N8D1 485 aaKnown RBP16.14■□□□□ 0.17
MCF2L-217ENST00000441756 ATP11CQ8NB49 1132 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 UCMAQ8WVF2 138 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 DNASE1L2Q92874 299 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 NUDCD1Q96RS6 583 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 RBM15Q96T37 977 aaKnown RBP eCLIP16.14■□□□□ 0.17
MCF2L-217ENST00000441756 SCUBE2Q9NQ36 999 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 TRPV5Q9NQA5 729 aa16.14■□□□□ 0.17
MCF2L-217ENST00000441756 F5H423 210 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-217ENST00000441756 GOLGA8MH3BSY2 632 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 TP73O15350 636 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 IGSF6O95976 241 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 SRPRAP08240 638 aaKnown RBP16.13■□□□□ 0.17
MCF2L-217ENST00000441756 CISD3P0C7P0 127 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 CSNK1DP48730 415 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 ST8SIA6P61647 398 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 AP1S1P61966 158 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 CYTH1Q15438 398 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 SPDYCQ5MJ68 293 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 TMC3Q7Z5M5 1100 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 ADIPOR2Q86V24 386 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 PCDH20Q8N6Y1 951 aaKnown RBP16.13■□□□□ 0.17
MCF2L-217ENST00000441756 TERB1Q8NA31 727 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 TSEN2Q8NCE0 465 aaKnown RBP16.13■□□□□ 0.17
MCF2L-217ENST00000441756 ST13P5Q8NFI4 369 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-217ENST00000441756 LRRC39Q96DD0 335 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 ZNF419Q96HQ0 510 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-217ENST00000441756 GDAP1L1Q96MZ0 367 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 SEMA3CQ99985 751 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 CIPCQ9C0C6 399 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 GTSE1Q9NYZ3 720 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 LHX3Q9UBR4 397 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 COL4A3Q01955 1670 aa16.13■□□□□ 0.17
MCF2L-217ENST00000441756 KIAA1549LQ6ZVL6 1849 aa16.12■□□□□ 0.17
MCF2L-217ENST00000441756 ARNTLO00327 626 aa16.12■□□□□ 0.17
MCF2L-217ENST00000441756 APODP05090 189 aa16.12■□□□□ 0.17
MCF2L-217ENST00000441756 DLDP09622 509 aaKnown RBP16.12■□□□□ 0.17
MCF2L-217ENST00000441756 FAM153BP0C7A2 387 aa16.12■□□□□ 0.17
MCF2L-217ENST00000441756 SRCP12931 536 aa16.12■□□□□ 0.17
MCF2L-217ENST00000441756 CD86P42081 329 aa16.12■□□□□ 0.17
MCF2L-217ENST00000441756 NUMBP49757 651 aa16.12■□□□□ 0.17
MCF2L-217ENST00000441756 MAXP61244 160 aa16.12■□□□□ 0.17
MCF2L-217ENST00000441756 SNRPD1P62314 119 aaKnown RBP16.12■□□□□ 0.17
MCF2L-217ENST00000441756 PFKPQ01813 784 aa16.12■□□□□ 0.17
MCF2L-217ENST00000441756 DSC2Q02487 901 aa16.12■□□□□ 0.17
MCF2L-217ENST00000441756 KDSRQ06136 332 aa16.12■□□□□ 0.17
MCF2L-217ENST00000441756 DHX9Q08211 1270 aaKnown RBP16.12■□□□□ 0.17
MCF2L-217ENST00000441756 GEN1Q17RS7 908 aa16.12■□□□□ 0.17
MCF2L-217ENST00000441756 GAB4Q2WGN9 574 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms