RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 CCDC15Q0P6D6 951 aa24.46■■□□□ 1.51
CPNE1-217ENST00000439669 MAPK8IP2Q13387 824 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-217ENST00000439669 KCNT1Q5JUK3 1230 aa24.46■■□□□ 1.51
CPNE1-217ENST00000439669 SARM1Q6SZW1 724 aa24.46■■□□□ 1.51
CPNE1-217ENST00000439669 LAYNQ6UX15 382 aa24.46■■□□□ 1.51
CPNE1-217ENST00000439669 ADAT2Q7Z6V5 191 aaKnown RBP24.46■■□□□ 1.51
CPNE1-217ENST00000439669 HSPH1Q92598 858 aa24.46■■□□□ 1.51
CPNE1-217ENST00000439669 PPP1R16AQ96I34 528 aa24.46■■□□□ 1.51
CPNE1-217ENST00000439669 CELF6Q96J87 481 aaKnown RBP24.46■■□□□ 1.51
CPNE1-217ENST00000439669 ORAI3Q9BRQ5 295 aa24.46■■□□□ 1.51
CPNE1-217ENST00000439669 KLC2Q9H0B6 622 aa24.46■■□□□ 1.51
CPNE1-217ENST00000439669 KDM4CQ9H3R0 1056 aa24.46■■□□□ 1.51
CPNE1-217ENST00000439669 ZDHHC6Q9H6R6 413 aa24.46■■□□□ 1.51
CPNE1-217ENST00000439669 OSGEPQ9NPF4 335 aa24.46■■□□□ 1.51
CPNE1-217ENST00000439669 HECAQ9UBI9 543 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-217ENST00000439669 WASF2Q9Y6W5 498 aa24.46■■□□□ 1.51
CPNE1-217ENST00000439669 MYO1FO00160 1098 aa24.45■■□□□ 1.5
CPNE1-217ENST00000439669 RNF103O00237 685 aa24.45■■□□□ 1.5
CPNE1-217ENST00000439669 TMCC1O94876 653 aa24.45■■□□□ 1.5
CPNE1-217ENST00000439669 TCF4P15884 667 aa24.45■■□□□ 1.5
CPNE1-217ENST00000439669 SSR1P43307 286 aaKnown RBP24.45■■□□□ 1.5
CPNE1-217ENST00000439669 GRIA4P48058 902 aa24.45■■□□□ 1.5
CPNE1-217ENST00000439669 NOVA1P51513 510 aaKnown RBP24.45■■□□□ 1.5
CPNE1-217ENST00000439669 ZNF135P52742 658 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-217ENST00000439669 SNRPD1P62314 119 aaKnown RBP24.45■■□□□ 1.5
CPNE1-217ENST00000439669 SERINC3Q13530 473 aa24.45■■□□□ 1.5
CPNE1-217ENST00000439669 PIP5KL1Q5T9C9 394 aa24.45■■□□□ 1.5
CPNE1-217ENST00000439669 NIPA2Q8N8Q9 360 aa24.45■■□□□ 1.5
CPNE1-217ENST00000439669 OR6K2Q8NGY2 324 aa24.45■■□□□ 1.5
CPNE1-217ENST00000439669 ZNF564Q8TBZ8 553 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-217ENST00000439669 CTNNBL1Q8WYA6 563 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-217ENST00000439669 SLC6A18Q96N87 628 aa24.45■■□□□ 1.5
CPNE1-217ENST00000439669 CTTNBP2NLQ9P2B4 639 aa24.45■■□□□ 1.5
CPNE1-217ENST00000439669 TPX2Q9ULW0 747 aaKnown RBP24.45■■□□□ 1.5
CPNE1-217ENST00000439669 CACNA1EQ15878 2313 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 H3BRJ5 948 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 ERCC2P18074 760 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 NDST2P52849 883 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 RACK1P63244 317 aaKnown RBP24.44■■□□□ 1.5
CPNE1-217ENST00000439669 BOLA3Q53S33 107 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 PSAPL1Q6NUJ1 521 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 IL27RAQ6UWB1 636 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 ERN2Q76MJ5 926 aaKnown RBP24.44■■□□□ 1.5
CPNE1-217ENST00000439669 CNGA4Q8IV77 575 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 OR2AP1Q8NGE2 309 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 CASKIN2Q8WXE0 1202 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 CHP1Q99653 195 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 PACSIN1Q9BY11 444 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 LRRC19Q9H756 370 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 EBF2Q9HAK2 575 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 AASDHPPTQ9NRN7 309 aa24.44■■□□□ 1.5
CPNE1-217ENST00000439669 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.44■■□□□ 1.5
CPNE1-217ENST00000439669 DNAAF2Q9NVR5 837 aaKnown RBP24.44■■□□□ 1.5
CPNE1-217ENST00000439669 CWC15Q9P013 229 aaKnown RBP24.44■■□□□ 1.5
CPNE1-217ENST00000439669 ARHGAP42A6NI28 874 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 AKR1B15C9JRZ8 316 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-217ENST00000439669 KRIT1O00522 736 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 KCNK5O95279 499 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 CER1O95813 267 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 GSRP00390 522 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 H2AFZP0C0S5 128 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 MAT2AP31153 395 aaKnown RBP24.43■■□□□ 1.5
CPNE1-217ENST00000439669 ARL4AP40617 200 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 RHOAP61586 193 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 BNC1Q01954 994 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 ASTE1Q2TB18 679 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-217ENST00000439669 ATXN7L2Q5T6C5 722 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-217ENST00000439669 H2AFVQ71UI9 128 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 PRPF39Q86UA1 669 aaKnown RBP24.43■■□□□ 1.5
CPNE1-217ENST00000439669 PLPP6Q8IY26 295 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 NETO2Q8NC67 525 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 SERAC1Q96JX3 654 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 CCDC42Q96M95 316 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 GDAP1L1Q96MZ0 367 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 SLC39A8Q9C0K1 460 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 GAREM1Q9H706 876 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 PREBQ9HCU5 417 aa24.43■■□□□ 1.5
CPNE1-217ENST00000439669 UBA2Q9UBT2 640 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-217ENST00000439669 ASCC3Q8N3C0 2202 aaKnown RBP24.42■■□□□ 1.5
CPNE1-217ENST00000439669 RARAP10276 462 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 ITGB7P26010 798 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 GKP32189 559 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 NEK3P51956 506 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 C21orf59P57076 290 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 TAS2R38P59533 333 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 DPYSL2Q16555 572 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 KIF19Q2TAC6 998 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 DEFB124Q8NES8 71 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 HDAC8Q9BY41 377 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 SPTLC3Q9NUV7 552 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 UVRAGQ9P2Y5 699 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 ANKRD6Q9Y2G4 727 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 PLXNA2O75051 1894 aa24.42■■□□□ 1.5
CPNE1-217ENST00000439669 CACNA1AO00555 2505 aa24.41■■□□□ 1.5
CPNE1-217ENST00000439669 C10orf142B7Z368 130 aa24.41■■□□□ 1.5
CPNE1-217ENST00000439669 DFFAO00273 331 aa24.41■■□□□ 1.5
CPNE1-217ENST00000439669 LATO43561 262 aa24.41■■□□□ 1.5
CPNE1-217ENST00000439669 RNGTTO60942 597 aaKnown RBP24.41■■□□□ 1.5
CPNE1-217ENST00000439669 IGSF6O95976 241 aa24.41■■□□□ 1.5
CPNE1-217ENST00000439669 CSRP1P21291 193 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms