RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 UBQLN1Q9UMX0 589 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 A0A096LPK6 155 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 A6NL46 340 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 B4GAT1O43505 415 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 TSPAN3O60637 253 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 PGK1P00558 417 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 OCM2P0CE71 109 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 OCMP0CE72 109 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 PCNAP12004 261 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 TGM2P21980 687 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 L1CAMP32004 1257 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 GRIA3P42263 894 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 ABCE1P61221 599 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 CEACAM7Q14002 265 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 KIF19Q2TAC6 998 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 PABPC1LQ4VXU2 614 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 CXCL17Q6UXB2 119 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 GPR142Q7Z601 462 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 GPR152Q8TDT2 470 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 GAB3Q8WWW8 586 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 PRICKLE1Q96MT3 831 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 SLC29A1Q99808 456 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 EBNA1BP2Q99848 306 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 TINF2Q9BSI4 451 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 MTG1Q9BT17 334 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 BRD8Q9H0E9 1235 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 CHST12Q9NRB3 414 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 RSL24D1Q9UHA3 163 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 STAP1Q9ULZ2 295 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 IGKV6-21A0A0C4DH24 114 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 MYBPHLA2RUH7 354 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 FAM72CH0Y354 149 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 LSM1O15116 133 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 CELF2O95319 508 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 ALDOAP04075 364 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 COL6A2P12110 1019 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 BDNFP23560 247 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 NDST2P52849 883 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 PIGFQ07326 219 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 FAM72AQ5TYM5 149 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 FAM72DQ6L9T8 149 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 FAM72BQ86X60 149 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 BPIFB6Q8NFQ5 453 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 FNIP1Q8TF40 1166 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 PDCD6IPQ8WUM4 868 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 CERS2Q96G23 380 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 TNIP3Q96KP6 325 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 KLHL32Q96NJ5 620 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 C16orf70Q9BSU1 422 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 DGCR6LQ9BY27 220 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 MIR1-1HGQ9H1L0 117 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 PLEKHA5Q9HAU0 1116 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 VPS51Q9UID3 782 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 TLK1Q9UKI8 766 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZNFX1Q9P2E3 1918 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 SF3B1O75533 1304 aaKnown RBP eCLIP10.08□□□□□ -0.89e-7■■■■■ 35.8
CDC42SE1-202ENST00000439374 SMIM31A0A1B0GVY4 71 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 CCL22O00626 93 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 SCAMP3O14828 347 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 CHADO15335 359 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 SNAI1O95863 264 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 SERPINE1P05121 402 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 MMP3P08254 477 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 ERCC2P18074 760 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 PROZP22891 400 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 MAP4P27816 1152 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 CAPRIN1Q14444 709 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 KCNJ11Q14654 390 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 LSM12Q3MHD2 195 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 FSCBQ5H9T9 825 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 TAPT1Q6NXT6 567 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 TMEM26Q6ZUK4 368 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 B3GALNT2Q8NCR0 500 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 RMND5BQ96G75 393 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 CNDP1Q96KN2 507 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 SERPINI1Q99574 410 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 POLE4Q9NR33 117 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 PTTG2Q9NZH5 202 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 NME7Q9Y5B8 376 aa10.08□□□□□ -0.8
CDC42SE1-202ENST00000439374 HMX2A2RU54 273 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 YJEFN3A6XGL0 299 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 THRAP10827 490 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 FGF3P11487 239 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 NFKBIAP25963 317 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 SCNN1GP51170 649 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 NKX2-5P52952 324 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 MADCAM1Q13477 382 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 USP10Q14694 798 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 OTOP3Q7RTS5 596 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 GPR141Q7Z602 305 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 TLK2Q86UE8 772 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 DCBLD1Q8N8Z6 715 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 ANKRD52Q8NB46 1076 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 SPATA22Q8NHS9 363 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 SLC35F5Q8WV83 523 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 POLR1BQ9H9Y6 1135 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 CHRAC1Q9NRG0 131 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 EXD2Q9NVH0 621 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 EVLQ9UI08 416 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 PPP2R3BQ9Y5P8 575 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms