RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SUZ12Q15022 739 aaKnown RBP12.24□□□□□ -0.45
NEK1-201ENST00000439128 PCID2Q5JVF3 399 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 SLC9A7Q96T83 725 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 PRDM16Q9HAZ2 1276 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 ZNF711Q9Y462 761 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 CES1P23141 567 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 NOS3P29474 1203 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 CCZ1BP86790 482 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 CCZ1P86791 482 aaPredicted RBP12.24□□□□□ -0.45
NEK1-201ENST00000439128 KBTBD12Q3ZCT8 623 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 TPGS2Q68CL5 300 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 CYGBQ8WWM9 190 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 BSNDQ8WZ55 320 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 TIFAQ96CG3 184 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 RAD9AQ99638 391 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 ARHGAP39Q9C0H5 1083 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 AVENQ9NQS1 362 aaPredicted RBP12.24□□□□□ -0.45
NEK1-201ENST00000439128 ZSCAN32Q9NX65 697 aa12.24□□□□□ -0.45
NEK1-201ENST00000439128 BAIAP3O94812 1187 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 CCNDBP1O95273 360 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 LYPLA2O95372 231 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 GJA1P17302 382 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 TFE3P19532 575 aaPredicted RBP12.23□□□□□ -0.45
NEK1-201ENST00000439128 CDH3P22223 829 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 ELK3P41970 407 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 TTPAP49638 278 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 MAD2L1Q13257 205 aaPredicted RBP12.23□□□□□ -0.45
NEK1-201ENST00000439128 GRM2Q14416 872 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 C16orf72Q14CZ0 275 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 FIGNQ5HY92 759 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 TMEM164Q5U3C3 297 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 LRRC49Q8IUZ0 686 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 SYT12Q8IV01 421 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 FNDC5Q8NAU1 212 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 CPNE1Q99829 537 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 HGH1Q9BTY7 390 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 CNPPD1Q9BV87 410 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 CD84Q9UIB8 345 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 KCPQ6ZWJ8 1503 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 ONECUT3O60422 494 aaPredicted RBP12.23□□□□□ -0.45
NEK1-201ENST00000439128 POU1F1P28069 291 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 ARL2P36404 184 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 ACSM2AQ08AH3 577 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 MAMLD1Q13495 774 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 ACSM2BQ68CK6 577 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 IRGCQ6NXR0 463 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 GRASPQ7Z6J2 395 aaPredicted RBP12.23□□□□□ -0.45
NEK1-201ENST00000439128 GATAD2AQ86YP4 633 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 ACAT2Q9BWD1 397 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 SYBUQ9NX95 663 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 MTO1Q9Y2Z2 717 aaKnown RBP12.23□□□□□ -0.45
NEK1-201ENST00000439128 SLIT2O94813 1529 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 CYP1A1P04798 512 aaPredicted RBP12.23□□□□□ -0.45
NEK1-201ENST00000439128 LPOP22079 712 aaPredicted RBP12.23□□□□□ -0.45
NEK1-201ENST00000439128 COPZ1P61923 177 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 PURAQ00577 322 aaKnown RBP12.23□□□□□ -0.45
NEK1-201ENST00000439128 ARHGAP1Q07960 439 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 SF1Q15637 639 aaKnown RBP12.23□□□□□ -0.45
NEK1-201ENST00000439128 XKR4Q5GH76 650 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 STXBP5Q5T5C0 1151 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 SEL1L3Q68CR1 1132 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 C2orf73Q8N5S3 287 aaPredicted RBP12.23□□□□□ -0.45
NEK1-201ENST00000439128 NETO2Q8NC67 525 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 FAIM2Q9BWQ8 316 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 B3GNT5Q9BYG0 378 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 ARHGAP20Q9P2F6 1191 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 APOC4-APOC2K7ER74 178 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 APOC2P02655 101 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 GP5P40197 560 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 ALG11Q2TAA5 492 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 NEPROQ6NW34 567 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 HOMEZQ8IX15 550 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 LRRN4Q8WUT4 740 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 ANKRD49Q8WVL7 239 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 INPP5DQ92835 1189 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 COPS8Q99627 209 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 LPIN3Q9BQK8 851 aa12.23□□□□□ -0.45
NEK1-201ENST00000439128 FBXO6Q9NRD1 293 aaPredicted RBP12.23□□□□□ -0.45
NEK1-201ENST00000439128 HBS1LQ9Y450 684 aaKnown RBP12.23□□□□□ -0.45
NEK1-201ENST00000439128 B4GALT4O60513 344 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 ILF2Q12905 390 aaKnown RBP12.22□□□□□ -0.45
NEK1-201ENST00000439128 ESRP1Q6NXG1 681 aaKnown RBP12.22□□□□□ -0.45
NEK1-201ENST00000439128 FAM228AQ86W67 206 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 ST13P4Q8IZP2 240 aaPredicted RBP12.22□□□□□ -0.45
NEK1-201ENST00000439128 SEMA4DQ92854 862 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 FAM120BQ96EK7 910 aaKnown RBP12.22□□□□□ -0.45
NEK1-201ENST00000439128 PCED1BQ96HM7 432 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 SAMD11Q96NU1 681 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 KCNK16Q96T55 309 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 TMEM175Q9BSA9 504 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 PIF1Q9H611 641 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 ZCCHC17Q9NP64 241 aaKnown RBP12.22□□□□□ -0.45
NEK1-201ENST00000439128 CES2O00748 559 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 RABGGTBP53611 331 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 CDK18Q07002 472 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 STX5Q13190 355 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 EOGTQ5NDL2 527 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 SLC39A8Q9C0K1 460 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 MKL2Q9ULH7 1088 aa12.22□□□□□ -0.45
NEK1-201ENST00000439128 ASB3Q9Y575 518 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms