RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 RTL3Q8N8U3 475 aaKnown RBP10.57□□□□□ -0.72
CD44-210ENST00000434472 TRPV1Q8NER1 839 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 IPMKQ8NFU5 416 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 CALML6Q8TD86 181 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 FAM136AQ96C01 138 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 CLPTM1LQ96KA5 538 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 CNDP1Q96KN2 507 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 FCRL2Q96LA5 508 aaPredicted RBP10.57□□□□□ -0.72
CD44-210ENST00000434472 C1orf74Q96LT6 269 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 NR1H4Q96RI1 486 aaPredicted RBP10.57□□□□□ -0.72
CD44-210ENST00000434472 RANBP9Q96S59 729 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 SERPINI1Q99574 410 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 RBM22Q9NW64 420 aaKnown RBP eCLIP10.57□□□□□ -0.72
CD44-210ENST00000434472 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.57□□□□□ -0.72
CD44-210ENST00000434472 PRPF19Q9UMS4 504 aaKnown RBP10.57□□□□□ -0.72
CD44-210ENST00000434472 SUFUQ9UMX1 484 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 SQORQ9Y6N5 450 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 MYO18AQ92614 2054 aaKnown RBP10.57□□□□□ -0.72
CD44-210ENST00000434472 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.56□□□□□ -0.72
CD44-210ENST00000434472 FAM95CA0A1B0GW59 222 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 RGSL1A5PLK6 1076 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 MAGEA13PA6NCF6 341 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.56□□□□□ -0.72
CD44-210ENST00000434472 TNFRSF10BO14763 440 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 DCXO43602 365 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 BAG2O95816 211 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 AHSGP02765 367 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 CYBAP13498 195 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 ITGAXP20702 1163 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 GRIK1P39086 918 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 THPOP40225 353 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 ABCG1P45844 678 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 GRIA4P48058 902 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 ARCN1P48444 511 aaKnown RBP10.56□□□□□ -0.72
CD44-210ENST00000434472 CD151P48509 253 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 TUBP50607 506 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 ZNF157P51786 506 aaPredicted RBP10.56□□□□□ -0.72
CD44-210ENST00000434472 NDST2P52849 883 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 SLC12A2P55011 1212 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 USP4Q13107 963 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 VWA5B1Q5TIE3 1220 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 DENND5AQ6IQ26 1287 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 ATG14Q6ZNE5 492 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 TMC7Q7Z402 723 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 SLC41A1Q8IVJ1 513 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 FBXW8Q8N3Y1 598 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 AFAP1L2Q8N4X5 818 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 POU5F2Q8N7G0 328 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 C2CD4AQ8NCU7 369 aaPredicted RBP10.56□□□□□ -0.72
CD44-210ENST00000434472 OR10T2Q8NGX3 314 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 SPATA22Q8NHS9 363 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 RP9Q8TA86 221 aaKnown RBP10.56□□□□□ -0.72
CD44-210ENST00000434472 KCTD4Q8WVF5 259 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 CCDC126Q96EE4 140 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 PGLYRP2Q96PD5 576 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 PAAF1Q9BRP4 392 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 FSD1LQ9BXM9 530 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 SLC25A51Q9H1U9 297 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 AGO3Q9H9G7 860 aaKnown RBP10.56□□□□□ -0.72
CD44-210ENST00000434472 IPO11Q9UI26 975 aaKnown RBP10.56□□□□□ -0.72
CD44-210ENST00000434472 SCOCQ9UIL1 159 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 CDH22Q9UJ99 828 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 MAGED2Q9UNF1 606 aaPredicted RBP10.56□□□□□ -0.72
CD44-210ENST00000434472 CDYLQ9Y232 598 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 WASF2Q9Y6W5 498 aa10.56□□□□□ -0.72
CD44-210ENST00000434472 ZNF638Q14966 1978 aaKnown RBP10.56□□□□□ -0.72
CD44-210ENST00000434472 HEATR9A2RTY3 570 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 TRPC5OSA6NMA1 111 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 KCNU1A8MYU2 1149 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 TARM1B6A8C7 271 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 E9PAM4 449 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 MGEA5O60502 916 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 VAPBO95292 243 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 PIGNO95427 931 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 PDHA1P08559 390 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 SLC35E2BP0CK96 405 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 MPSTP25325 297 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 PIK3R1P27986 724 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 MLLT6P55198 1093 aaPredicted RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 DNAJB13P59910 316 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 RPL26P61254 145 aaKnown RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 DSG1Q02413 1049 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 YWHAHQ04917 246 aaPredicted RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 TBL3Q12788 808 aaKnown RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 POU6F1Q14863 301 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 FAM26DQ5JW98 314 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 ACBD5Q5T8D3 534 aaPredicted RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 ESRP1Q6NXG1 681 aaKnown RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 MSANTD2Q6P1R3 559 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 TMEM154Q6P9G4 183 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 ARHGAP36Q6ZRI8 547 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 SCD5Q86SK9 330 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 LRRTM3Q86VH5 581 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 IFNL1Q8IU54 200 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 DEFB107AQ8IZN7 70 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 FSTL5Q8N475 847 aaPredicted RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 ACVR1CQ8NER5 493 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 SCAMP5Q8TAC9 235 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 CASP10Q92851 521 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 SPDL1Q96EA4 605 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms