RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 INO80DQ53TQ3 878 aaPredicted RBP15.79■□□□□ 0.12
TREX1-201ENST00000433541 ATXN7L2Q5T6C5 722 aaPredicted RBP15.79■□□□□ 0.12
TREX1-201ENST00000433541 MFSD7Q6UXD7 560 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 SPOCD1Q6ZMY3 1216 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 DPY19L3Q6ZPD9 716 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 ARHGAP36Q6ZRI8 547 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 TP53INP2Q8IXH6 220 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 TMEFF1Q8IYR6 380 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 KATNAL2Q8IYT4 538 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 RCOR2Q8IZ40 523 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 HDDC3Q8N4P3 179 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 RNF10Q8N5U6 811 aaKnown RBP15.79■□□□□ 0.12
TREX1-201ENST00000433541 DEFB119Q8N690 84 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 OR2AP1Q8NGE2 309 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 OR2A12Q8NGT7 310 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 KRT35Q92764 455 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 EXOC2Q96KP1 924 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 HEPHQ9BQS7 1158 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 PABPC3Q9H361 631 aaKnown RBP15.79■□□□□ 0.12
TREX1-201ENST00000433541 ITM2CQ9NQX7 267 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 CXorf51AA0A1B0GTR3 108 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 PRR23AA6NEV1 266 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 MEI4A8MW99 385 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 MX2P20592 715 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 C5AR1P21730 350 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 CTNNA1P35221 906 aaKnown RBP15.78■□□□□ 0.12
TREX1-201ENST00000433541 RWDD2BP57060 319 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 TFDP2Q14188 446 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 PAFAH1B3Q15102 231 aaKnown RBP15.78■□□□□ 0.12
TREX1-201ENST00000433541 ARSIQ5FYB1 569 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 TFDP3Q5H9I0 405 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 TMCO4Q5TGY1 634 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 AFMIDQ63HM1 303 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 CHST14Q8NCH0 376 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 SNX19Q92543 992 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 ISG20Q96AZ6 181 aaKnown RBP15.78■□□□□ 0.12
TREX1-201ENST00000433541 FAF2Q96CS3 445 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 TOE1Q96GM8 510 aaKnown RBP15.78■□□□□ 0.12
TREX1-201ENST00000433541 PPP1R16AQ96I34 528 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 FAM129BQ96TA1 746 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 GPR174Q9BXC1 333 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 BTBD1Q9H0C5 482 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 USP36Q9P275 1121 aaKnown RBP15.78■□□□□ 0.12
TREX1-201ENST00000433541 PACSIN2Q9UNF0 486 aaPredicted RBP15.78■□□□□ 0.12
TREX1-201ENST00000433541 PPP2R2CQ9Y2T4 447 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 TTLL3Q9Y4R7 772 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 CAPN6Q9Y6Q1 641 aa15.78■□□□□ 0.12
TREX1-201ENST00000433541 ZNF487B1APH4 448 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 LEFTY1O75610 366 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 CD160O95971 181 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 GSRP00390 522 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 KRT10P13645 584 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 GBE1Q04446 702 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 LBRQ14739 615 aaKnown RBP15.77■□□□□ 0.12
TREX1-201ENST00000433541 PLK5Q496M5 336 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 CFAP58Q5T655 872 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 LAIR1Q6GTX8 287 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 TIGD7Q6NT04 549 aaPredicted RBP15.77■□□□□ 0.12
TREX1-201ENST00000433541 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.77■□□□□ 0.12
TREX1-201ENST00000433541 VSIG1Q86XK7 387 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 PQLC3Q8N755 202 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 LRRC57Q8N9N7 239 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 EXD1Q8NHP7 514 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 DUSP15Q9H1R2 295 aaPredicted RBP15.77■□□□□ 0.12
TREX1-201ENST00000433541 PDFQ9HBH1 243 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 HAUS2Q9NVX0 235 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 SEPT3Q9UH03 358 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 EVLQ9UI08 416 aaPredicted RBP15.77■□□□□ 0.12
TREX1-201ENST00000433541 MBD1Q9UIS9 605 aaPredicted RBP15.77■□□□□ 0.12
TREX1-201ENST00000433541 PCDHA3Q9Y5H8 950 aa15.77■□□□□ 0.12
TREX1-201ENST00000433541 C3orf70A6NLC5 250 aaPredicted RBP15.76■□□□□ 0.11
TREX1-201ENST00000433541 MIF4GDA9UHW6 222 aaKnown RBP15.76■□□□□ 0.11
TREX1-201ENST00000433541 PLK4O00444 970 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 PPP1R12AO14974 1030 aaPredicted RBP15.76■□□□□ 0.11
TREX1-201ENST00000433541 GFRA3O60609 400 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 CST8O60676 142 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 POP4O95707 220 aaKnown RBP15.76■□□□□ 0.11
TREX1-201ENST00000433541 CTNNA2P26232 953 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 GKP32189 559 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 PLA2G5P39877 138 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 GARSP41250 739 aaKnown RBP15.76■□□□□ 0.11
TREX1-201ENST00000433541 CDKN2BP42772 138 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 RENBPP51606 427 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 CREB5Q02930 508 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 ITKQ08881 620 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 CCDC15Q0P6D6 951 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 CCDC173Q0VFZ6 552 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 AP1B1Q10567 949 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 RFTN1Q14699 578 aaPredicted RBP15.76■□□□□ 0.11
TREX1-201ENST00000433541 LYSMD4Q5XG99 296 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 PMS2CLQ68D20 193 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 NPNTQ6UXI9 565 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 USP30Q70CQ3 517 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 CYP2U1Q7Z449 544 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 NT5DC3Q86UY8 548 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 LRRC49Q8IUZ0 686 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 RGL4Q8IZJ4 473 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 TMIEQ8NEW7 156 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 OR14C36Q8NHC7 312 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 HAUS1Q96CS2 278 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms