RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 SCNN1BP51168 640 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 NRLP54845 237 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ALDH18A1P54886 795 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 SNAP25P60880 206 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 TXNL4AP83876 142 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 MYBPC1Q00872 1141 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 KRT76Q01546 638 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 NAB1Q13506 487 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 UBAP2LQ14157 1087 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 RARS2Q5T160 578 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 STEAP4Q687X5 459 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 TMEM270Q6UE05 265 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 RFX8Q6ZV50 586 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 NEK10Q6ZWH5 1172 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 SLC25A41Q8N5S1 370 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ZBTB8BQ8NAP8 495 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 SMYD1Q8NB12 490 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 SLC4A11Q8NBS3 891 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 DEPTORQ8TB45 409 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ADAMTS16Q8TE57 1224 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 USP6NLQ92738 828 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ISL2Q96A47 359 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 UBXN10Q96LJ8 280 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 LRGUKQ96M69 825 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 MCEEQ96PE7 176 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ASB2Q96Q27 587 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 CGRRF1Q99675 332 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 CHCHD6Q9BRQ6 235 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 TRIM56Q9BRZ2 755 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 MECRQ9BV79 373 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 KLC2Q9H0B6 622 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 RPAP3Q9H6T3 665 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 GPRC5CQ9NQ84 441 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 MOCS1Q9NZB8 636 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 LRFN2Q9ULH4 789 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 GABRQQ9UN88 632 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ARHGAP26Q9UNA1 814 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 AGTPBP1Q9UPW5 1226 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 PCDHB4Q9Y5E5 795 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 AP4B1Q9Y6B7 739 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 KANSL1LA0AUZ9 987 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 SH3PXD2BA1X283 911 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 BCLAF3A2AJT9 711 aaKnown RBP8.19□□□□□ -1.1
VTI1A-202ENST00000432306 ARHGAP42A6NI28 874 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 WDR64B1ANS9 1081 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 ERVH48-1M5A8F1 160 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 PLOD2O00469 737 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 CXCL11O14625 94 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 TNPO2O14787 897 aaKnown RBP8.19□□□□□ -1.1
VTI1A-202ENST00000432306 SIAH2O43255 324 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 GLRA3O75311 464 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 STBD1O95210 358 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 PGM3O95394 542 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 CRTAMO95727 393 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 CALCAP01258 141 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 PROCP04070 461 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 FAM58BPP0C7Q3 252 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 ELNP15502 786 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 IL1R2P27930 398 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 GJC1P36383 396 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 RECQLP46063 649 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-202ENST00000432306 PSMD8P48556 350 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 HK2P52789 917 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 ATXN1P54253 815 aaKnown RBP8.19□□□□□ -1.1
VTI1A-202ENST00000432306 EIF3EP60228 445 aaKnown RBP8.19□□□□□ -1.1
VTI1A-202ENST00000432306 RFTN1Q14699 578 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-202ENST00000432306 SHROOM1Q2M3G4 852 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-202ENST00000432306 FAM47CQ5HY64 1035 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 RALGPS1Q5JS13 557 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 SLC6A19Q695T7 634 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 DCUN1D2Q6PH85 259 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 MAVSQ7Z434 540 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 ADGRF2Q8IZF7 708 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 MCPH1Q8NEM0 835 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 TFB1MQ8WVM0 346 aaKnown RBP8.19□□□□□ -1.1
VTI1A-202ENST00000432306 KBTBD7Q8WVZ9 684 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 USP13Q92995 863 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-202ENST00000432306 SGF29Q96ES7 293 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 DUS3LQ96G46 650 aaKnown RBP8.19□□□□□ -1.1
VTI1A-202ENST00000432306 MYO19Q96H55 970 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 RILPQ96NA2 401 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 TSGA13Q96PP4 275 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 FAM193BQ96PV7 902 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-202ENST00000432306 CDK15Q96Q40 435 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 FERD3LQ96RJ6 166 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 SORT1Q99523 831 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 SERPINI1Q99574 410 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 LBHD1Q9BQE6 289 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-202ENST00000432306 SDCBP2Q9H190 292 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 CYP26B1Q9NR63 512 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 HACD3Q9P035 362 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 LAMA3Q16787 3333 aa8.19□□□□□ -1.1
VTI1A-202ENST00000432306 A0A1W2PRU2 124 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 CAPN8A6NHC0 703 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 SLC15A5A6NIM6 579 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 CXorf49A8MYA2 514 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 B4E171 279 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 CYB561D2O14569 222 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 HNRNPDLO14979 420 aaKnown RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 PLIN3O60664 434 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms