RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ALOX15BO15296 676 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 OPHN1O60890 802 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 CD160O95971 181 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 GAS8O95995 478 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 PEX11BO96011 259 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 MT-CO1P00395 513 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 HLA-DQB2P05538 268 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 CHRM1P11229 460 aaPredicted RBP11.18□□□□□ -0.62
CHD4-202ENST00000430771 HLA-EP13747 358 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 AOC1P19801 751 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 PTPN3P26045 913 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 STIP1P31948 543 aaKnown RBP11.18□□□□□ -0.62
CHD4-202ENST00000430771 AP1S1P61966 158 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 RAD51Q06609 339 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 SLC10A7Q0GE19 358 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 SNX1Q13596 522 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 GRM3Q14832 879 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 P3H1Q32P28 736 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 TEX44Q53QW1 395 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 CCDC137Q6PK04 289 aaKnown RBP11.18□□□□□ -0.62
CHD4-202ENST00000430771 Q6ZS52 159 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 Q6ZVU0 165 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 GSTA5Q7RTV2 222 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 ZNF572Q7Z3I7 529 aaPredicted RBP11.18□□□□□ -0.62
CHD4-202ENST00000430771 DSG4Q86SJ6 1040 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 PLPP6Q8IY26 295 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 RYBPQ8N488 228 aaPredicted RBP11.18□□□□□ -0.62
CHD4-202ENST00000430771 TEX26Q8N6G2 289 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 OR2AP1Q8NGE2 309 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 LRRN4Q8WUT4 740 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 OR8D1Q8WZ84 308 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 CLDN23Q96B33 292 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 SPATA13Q96N96 652 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 PPP1R2P1Q96PQ5 205 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 IL12RB2Q99665 862 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 TMEM121Q9BTD3 319 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 TM6SF2Q9BZW4 377 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 NT5MQ9NPB1 228 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 RBM22Q9NW64 420 aaKnown RBP eCLIP11.18□□□□□ -0.62
CHD4-202ENST00000430771 LHX3Q9UBR4 397 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 FEZ2Q9UHY8 353 aaPredicted RBP11.18□□□□□ -0.62
CHD4-202ENST00000430771 SLCO3A1Q9UIG8 710 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 TRHDEQ9UKU6 1024 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 DRG1Q9Y295 367 aaKnown RBP11.18□□□□□ -0.62
CHD4-202ENST00000430771 ACTL7AQ9Y615 435 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 TECTAO75443 2155 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 MYO18AQ92614 2054 aaKnown RBP11.17□□□□□ -0.62
CHD4-202ENST00000430771 GOLGA6CA6NDK9 693 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 GOLGA6BA6NDN3 693 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 C1QTNF3-AMACRE9PGA6 284 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 PDE2AO00408 941 aaPredicted RBP11.17□□□□□ -0.62
CHD4-202ENST00000430771 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
CHD4-202ENST00000430771 SMAD6O43541 496 aaKnown RBP11.17□□□□□ -0.62
CHD4-202ENST00000430771 BNIP3LO60238 219 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 ECEL1O95672 775 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 IFNB1P01574 187 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 JCHAINP01591 159 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 GOLGA6DP0CG33 693 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 CA4P22748 312 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 CES1P23141 567 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 COILP38432 576 aaPredicted RBP11.17□□□□□ -0.62
CHD4-202ENST00000430771 CLCN5P51795 746 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 CCNHP51946 323 aaPredicted RBP11.17□□□□□ -0.62
CHD4-202ENST00000430771 ITKQ08881 620 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 CYTH1Q15438 398 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 CARD16Q5EG05 197 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 EMC10Q5UCC4 262 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 ALG1LQ6GMV1 187 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 ARHGEF18Q6ZSZ5 1173 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 SYT13Q7L8C5 426 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 ZNF366Q8N895 744 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 CEP112Q8N8E3 955 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 ATL2Q8NHH9 583 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 CCHCR1Q8TD31 782 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 FRS2Q8WU20 508 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 RTP4Q96DX8 246 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 LRIG1Q96JA1 1093 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 EXOC2Q96KP1 924 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 ACOX2Q99424 681 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 CEP41Q9BYV8 373 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 DDX47Q9H0S4 455 aaKnown RBP11.17□□□□□ -0.62
CHD4-202ENST00000430771 GBA3Q9H227 469 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 TNKS2Q9H2K2 1166 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 POLMQ9NP87 494 aaPredicted RBP11.17□□□□□ -0.62
CHD4-202ENST00000430771 ZDHHC4Q9NPG8 344 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 SCUBE2Q9NQ36 999 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 GOLGA6AQ9NYA3 693 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 RSPH14Q9UHP6 348 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 HCN2Q9UL51 889 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 MTF2Q9Y483 593 aaPredicted RBP11.17□□□□□ -0.62
CHD4-202ENST00000430771 ANKRD36A6QL64 1941 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 BDP1A6H8Y1 2624 aa11.17□□□□□ -0.62
CHD4-202ENST00000430771 CTAGE15A4D2H0 777 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 C5orf60A6NFR6 353 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 RNASEH1O60930 286 aaKnown RBP11.16□□□□□ -0.62
CHD4-202ENST00000430771 ADAM23O75077 832 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 SIN3BO75182 1162 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 ALDH1A2O94788 518 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 PDGFBP01127 241 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms