RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 SUSD6Q92537 303 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 FATE1Q969F0 183 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 EXOC4Q96A65 974 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 CHFRQ96EP1 664 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 ZIM3Q96PE6 472 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 FCRL5Q96RD9 977 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 FAM129AQ9BZQ8 928 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 RETREG1Q9H6L5 497 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 TRPV4Q9HBA0 871 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 PLAC1Q9HBJ0 212 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 ABCB8Q9NUT2 735 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 GDE1Q9NZC3 331 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 MARK1Q9P0L2 795 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 TBC1D14Q9P2M4 693 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 LHX3Q9UBR4 397 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 UBA2Q9UBT2 640 aaPredicted RBP9.03□□□□□ -0.96
SMC6-204ENST00000428868 VPS28Q9UK41 221 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 TRHDEQ9UKU6 1024 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 CHMP2BQ9UQN3 213 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 FCF1Q9Y324 198 aaKnown RBP9.03□□□□□ -0.96
SMC6-204ENST00000428868 USP15Q9Y4E8 981 aaPredicted RBP9.03□□□□□ -0.96
SMC6-204ENST00000428868 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.03□□□□□ -0.96
SMC6-204ENST00000428868 VCANP13611 3396 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 E7EVH7 732 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 AGPSO00116 658 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 RIPK2O43353 540 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 PMPCBO75439 489 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 TMCC1O94876 653 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 ACSL3O95573 720 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 AP2A1O95782 977 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 CYBBP04839 570 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 ADH5P11766 374 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 LAMP2P13473 410 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 ELK3P41970 407 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 CD86P42081 329 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 MAGEA3P43357 314 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 MAGEA4P43358 317 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 CHRNA4P43681 627 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 SLC6A11P48066 632 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 LMAN1P49257 510 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 GPX6P59796 221 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 FAM193AP78312 1265 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 SKOR1P84550 965 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 ITKQ08881 620 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 ZNF235Q14590 738 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 GEN1Q17RS7 908 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 MPP7Q5T2T1 576 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 MARC1Q5VT66 337 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 C4orf22Q6V702 233 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 ZNF783Q6ZMS7 281 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 HDXQ7Z353 690 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 ADIPOR2Q86V24 386 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 LRRC49Q8IUZ0 686 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 ZBED8Q8IZ13 594 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 DCAF4L2Q8NA75 395 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 MCUQ8NE86 351 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 IPMKQ8NFU5 416 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 OR52K1Q8NGK4 314 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 MAFAQ8NHW3 353 aaPredicted RBP9.02□□□□□ -0.97
SMC6-204ENST00000428868 IMP4Q96G21 291 aaKnown RBP9.02□□□□□ -0.97
SMC6-204ENST00000428868 RPL10LQ96L21 214 aaKnown RBP9.02□□□□□ -0.97
SMC6-204ENST00000428868 MRGPRX2Q96LB1 330 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 SIGLEC10Q96LC7 697 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 RIPOR3Q96MK2 946 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 ZNF599Q96NL3 588 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 GAS2L1Q99501 681 aaPredicted RBP9.02□□□□□ -0.97
SMC6-204ENST00000428868 VAT1Q99536 393 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 FAM83CQ9BQN1 747 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 FICDQ9BVA6 458 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 SLC25A51Q9H1U9 297 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 EIF2B3Q9NR50 452 aaKnown RBP9.02□□□□□ -0.97
SMC6-204ENST00000428868 DONSONQ9NYP3 566 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 CD207Q9UJ71 328 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 GGA2Q9UJY4 613 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 PLAAQ9Y263 795 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 NFS1Q9Y697 457 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 PLXNA2O75051 1894 aa9.02□□□□□ -0.97
SMC6-204ENST00000428868 INSIG1O15503 277 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 ZNF821O75541 412 aaPredicted RBP9.01□□□□□ -0.97
SMC6-204ENST00000428868 PIAS1O75925 651 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 SUN1O94901 812 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 AGTP01019 485 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 CISD3P0C7P0 127 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 PABPC1P11940 636 aaKnown RBP9.01□□□□□ -0.97
SMC6-204ENST00000428868 CR2P20023 1033 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 MGAT1P26572 445 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 ADRA1AP35348 466 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 MTHFRP42898 656 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 RENBPP51606 427 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 ARL4CP56559 192 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 SESN2P58004 480 aaPredicted RBP9.01□□□□□ -0.97
SMC6-204ENST00000428868 KDSRQ06136 332 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 FCHO2Q0JRZ9 810 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 SLC29A2Q14542 456 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 EFTUD2Q15029 972 aaKnown RBP eCLIP9.01□□□□□ -0.972e-6■■□□□ 13.7
SMC6-204ENST00000428868 SMAD1Q15797 465 aaKnown RBP9.01□□□□□ -0.97
SMC6-204ENST00000428868 PCSK7Q16549 785 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 CERCAMQ5T4B2 595 aa9.01□□□□□ -0.97
SMC6-204ENST00000428868 ATXN7L2Q5T6C5 722 aaPredicted RBP9.01□□□□□ -0.97
SMC6-204ENST00000428868 DENND2CQ68D51 928 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms