RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 CCNT1O60563 726 aaKnown RBP4.93□□□□□ -1.62
LINC01040-201ENST00000425048 HEXIM1O94992 359 aaKnown RBP4.93□□□□□ -1.62
LINC01040-201ENST00000425048 MYL3P08590 195 aa4.93□□□□□ -1.62
LINC01040-201ENST00000425048 DGKAP23743 735 aa4.93□□□□□ -1.62
LINC01040-201ENST00000425048 DMP1Q13316 513 aaPredicted RBP4.93□□□□□ -1.62
LINC01040-201ENST00000425048 ATPAF1Q5TC12 328 aaPredicted RBP4.93□□□□□ -1.62
LINC01040-201ENST00000425048 GDPD4Q6W3E5 623 aa4.93□□□□□ -1.62
LINC01040-201ENST00000425048 MAB21L3Q8N8X9 362 aa4.93□□□□□ -1.62
LINC01040-201ENST00000425048 SCMH1Q96GD3 660 aa4.93□□□□□ -1.62
LINC01040-201ENST00000425048 DDX23Q9BUQ8 820 aaKnown RBP4.93□□□□□ -1.62
LINC01040-201ENST00000425048 PCDHAC2Q9Y5I4 1007 aa4.93□□□□□ -1.62
LINC01040-201ENST00000425048 SERINC4A6NH21 518 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 XPNPEP2O43895 674 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 LDLRP01130 860 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 TRIM27P14373 513 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 SKIV2L2P42285 1042 aaKnown RBP4.92□□□□□ -1.62
LINC01040-201ENST00000425048 TM4SF4P48230 202 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 TAF6P49848 677 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 CYP4A11Q02928 519 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 ST3GAL1Q11201 340 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 GXYLT1Q4G148 440 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 TUBA1AQ71U36 451 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 FMNL3Q8IVF7 1028 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 SCN4BQ8IWT1 228 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 SLC2A12Q8TD20 617 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 ARRDC3Q96B67 414 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 ZNF385AQ96PM9 386 aaKnown RBP4.92□□□□□ -1.62
LINC01040-201ENST00000425048 DUX3Q96PT4 197 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 PIGSQ96S52 555 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 TUBA1CQ9BQE3 449 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 KRTAP4-4Q9BYR3 166 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 NPFFR1Q9GZQ6 430 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 BRD8Q9H0E9 1235 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 MMP28Q9H239 520 aa4.92□□□□□ -1.62
LINC01040-201ENST00000425048 ERI2A8K979 691 aaKnown RBP4.91□□□□□ -1.62
LINC01040-201ENST00000425048 CHL1O00533 1208 aa4.91□□□□□ -1.62
LINC01040-201ENST00000425048 CH25HO95992 272 aa4.91□□□□□ -1.62
LINC01040-201ENST00000425048 AFPP02771 609 aaKnown RBP4.91□□□□□ -1.62
LINC01040-201ENST00000425048 RPL3P39023 403 aaKnown RBP4.91□□□□□ -1.62
LINC01040-201ENST00000425048 TROAPQ12815 778 aa4.91□□□□□ -1.62
LINC01040-201ENST00000425048 RBBP5Q15291 538 aaKnown RBP4.91□□□□□ -1.62
LINC01040-201ENST00000425048 TRMT1LQ7Z2T5 733 aaKnown RBP4.91□□□□□ -1.62
LINC01040-201ENST00000425048 CCAR1Q8IX12 1150 aaKnown RBP4.91□□□□□ -1.62
LINC01040-201ENST00000425048 PJA1Q8NG27 643 aa4.91□□□□□ -1.62
LINC01040-201ENST00000425048 TAF15Q92804 592 aaKnown RBP eCLIP4.91□□□□□ -1.62
LINC01040-201ENST00000425048 KIAA1191Q96A73 305 aa4.91□□□□□ -1.62
LINC01040-201ENST00000425048 FEM1CQ96JP0 617 aa4.91□□□□□ -1.62
LINC01040-201ENST00000425048 CCDC138Q96M89 665 aa4.91□□□□□ -1.62
LINC01040-201ENST00000425048 UBTD1Q9HAC8 227 aa4.91□□□□□ -1.62
LINC01040-201ENST00000425048 CLK4Q9HAZ1 481 aaKnown RBP4.91□□□□□ -1.62
LINC01040-201ENST00000425048 KLQ9UEF7 1012 aa4.91□□□□□ -1.62
LINC01040-201ENST00000425048 BAG5Q9UL15 447 aa4.91□□□□□ -1.62
LINC01040-201ENST00000425048 GAB2Q9UQC2 676 aa4.91□□□□□ -1.62
LINC01040-201ENST00000425048 ADAM18Q9Y3Q7 739 aa4.91□□□□□ -1.62
LINC01040-201ENST00000425048 A0A096LPK6 155 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 ANTXRLA6NF34 631 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 HNRNPRO43390 633 aaKnown RBP4.9□□□□□ -1.63
LINC01040-201ENST00000425048 FMO4P31512 558 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 GPR12P47775 334 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 RPS6KA3P51812 740 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 PHEXP78562 749 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 LONRF1Q17RB8 773 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 DCAF6Q58WW2 860 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 NFRKBQ6P4R8 1299 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 RINLQ6ZS11 566 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 GALNT7Q86SF2 657 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 SYTL1Q8IYJ3 562 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 GPT2Q8TD30 523 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 SECTM1Q8WVN6 248 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 MTBPQ96DY7 904 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 FBXO17Q96EF6 278 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 MSTO1Q9BUK6 570 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 TMEM51Q9NW97 253 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 HERC5Q9UII4 1024 aaKnown RBP4.9□□□□□ -1.63
LINC01040-201ENST00000425048 DHDHQ9UQ10 334 aa4.9□□□□□ -1.63
LINC01040-201ENST00000425048 SNED1Q8TER0 1413 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 NPIPB11E5RHQ5 1161 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 SYN3O14994 580 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 CYP4B1P13584 511 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 YWHAQP27348 245 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 DHX34Q14147 1143 aaKnown RBP4.89□□□□□ -1.63
LINC01040-201ENST00000425048 CALCRLQ16602 461 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 TBC1D9BQ66K14 1250 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 KLHL24Q6TFL4 600 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 SCAIQ8N9R8 606 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 IL17RCQ8NAC3 791 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 RFWD2Q8NHY2 731 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 TBC1D22AQ8WUA7 517 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 PAM16Q9Y3D7 125 aa4.89□□□□□ -1.63
LINC01040-201ENST00000425048 IGHV4OR15-8A0A075B7B6 117 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 TARSL2A2RTX5 802 aaKnown RBP4.88□□□□□ -1.63
LINC01040-201ENST00000425048 FAM172BPA6NC97 362 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 VNN2O95498 520 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 CRYAAP02489 173 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 TFRCP02786 760 aaKnown RBP4.88□□□□□ -1.63
LINC01040-201ENST00000425048 DHRS4L1P0CG22 281 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 DCTN1Q14203 1278 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 RPS6KA2Q15349 733 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 ACCSLQ4AC99 568 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 PLEKHA7Q6IQ23 1121 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms