RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 HCAR3P49019 387 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 KRT81Q14533 505 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 PUM1Q14671 1186 aaKnown RBP eCLIP22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 ARSIQ5FYB1 569 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 STPG1Q5TH74 334 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 AGBL4Q5VU57 503 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 POLNQ7Z5Q5 900 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 RYBPQ8N488 228 aaPredicted RBP22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 NETO2Q8NC67 525 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 TMIEQ8NEW7 156 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 OR6K2Q8NGY2 324 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 SLC35G2Q8TBE7 412 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 ZDHHC6Q9H6R6 413 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 CAPN10Q9HC96 672 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 PCDH18Q9HCL0 1135 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 DYRK4Q9NR20 520 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 LCMT1Q9UIC8 334 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 WASF2Q9Y6W5 498 aa22.73■■□□□ 1.23
PTCHD3P2-201ENST00000424937 DCHS1Q96JQ0 3298 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 A0A1B0GTW7 788 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 RNF103O00237 685 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 DFFAO00273 331 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 SLC30A4O14863 429 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 SLC7A4O43246 635 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 MAPK8P45983 427 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 PAPOLAP51003 745 aaKnown RBP22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 LIMK1P53667 647 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 CDH6P55285 790 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 MESDQ14696 234 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 ARHGAP12Q8IWW6 846 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 RHOT2Q8IXI1 618 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 RFFLQ8WZ73 363 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 FAM131CQ96AQ9 280 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 ARRDC3Q96B67 414 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 PPP1R16AQ96I34 528 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 CSPG4P5Q96PW8 444 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 HEPHQ9BQS7 1158 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 SLC39A8Q9C0K1 460 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 UBA2Q9UBT2 640 aaPredicted RBP22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 MFHAS1Q9Y4C4 1052 aa22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 ASCC3Q8N3C0 2202 aaKnown RBP22.72■■□□□ 1.23
PTCHD3P2-201ENST00000424937 BCAT2O15382 392 aaPredicted RBP22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 GSRP00390 522 aa22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 IGHV4-34P06331 123 aa22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 AMPD1P23109 780 aa22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 RHOAP61586 193 aa22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 SNRPD1P62314 119 aaKnown RBP22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 ATXN7L2Q5T6C5 722 aaPredicted RBP22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 TMCO3Q6UWJ1 677 aa22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 OR2AP1Q8NGE2 309 aa22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 CASKIN2Q8WXE0 1202 aa22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 RTKNQ9BST9 563 aa22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 GTPBP2Q9BX10 602 aaKnown RBP22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 SP110Q9HB58 689 aa22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 PDFQ9HBH1 243 aa22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 TMEM9BQ9NQ34 198 aa22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 SLCO1B1Q9Y6L6 691 aa22.71■■□□□ 1.23
PTCHD3P2-201ENST00000424937 TBC1D3DA0A087WVF3 549 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 TBC1D3IA0A087WXS9 549 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 TBC1D3EA0A087X179 549 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 TBC1D3KA0A087X1G2 549 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 TBC1D3FA6NER0 549 aaPredicted RBP22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 TBC1D3LB9A6J9 549 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 J3KR12 359 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 PLRG1O43660 514 aaKnown RBP22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 PRAMEF11O60813 436 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 IGSF6O95976 241 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 TBC1D3HP0C7X1 549 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 CD27P26842 260 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 MAN1A1P33908 653 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 TAS2R40P59535 323 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 PPP2CBP62714 309 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 PPP2CAP67775 309 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 INO80DQ53TQ3 878 aaPredicted RBP22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 PIP5KL1Q5T9C9 394 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 AFMIDQ63HM1 303 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 TBC1D3GQ6DHY5 549 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 TBC1D3CQ6IPX1 549 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 PLPP6Q8IY26 295 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 TBC1D3Q8IZP1 549 aaPredicted RBP22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 GDAP1L1Q96MZ0 367 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 PANX2Q96RD6 677 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 ETNK2Q9NVF9 386 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 KLHL11Q9NVR0 708 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 INTUQ9ULD6 942 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 TRPM6Q9BX84 2022 aa22.7■■□□□ 1.22
PTCHD3P2-201ENST00000424937 C4orf47A7E2U8 309 aa22.69■■□□□ 1.22
PTCHD3P2-201ENST00000424937 KRIT1O00522 736 aa22.69■■□□□ 1.22
PTCHD3P2-201ENST00000424937 GKP32189 559 aa22.69■■□□□ 1.22
PTCHD3P2-201ENST00000424937 ATXN3P54252 364 aaPredicted RBP22.69■■□□□ 1.22
PTCHD3P2-201ENST00000424937 ATP13A4Q4VNC1 1196 aa22.69■■□□□ 1.22
PTCHD3P2-201ENST00000424937 CCDC170Q8IYT3 715 aa22.69■■□□□ 1.22
PTCHD3P2-201ENST00000424937 LZTR1Q8N653 840 aa22.69■■□□□ 1.22
PTCHD3P2-201ENST00000424937 C1orf216Q8TAB5 229 aa22.69■■□□□ 1.22
PTCHD3P2-201ENST00000424937 TSC1Q92574 1164 aa22.69■■□□□ 1.22
PTCHD3P2-201ENST00000424937 ANP32EQ9BTT0 268 aa22.69■■□□□ 1.22
PTCHD3P2-201ENST00000424937 KDM4CQ9H3R0 1056 aa22.69■■□□□ 1.22
PTCHD3P2-201ENST00000424937 ARHGAP33O14559 1287 aa22.68■■□□□ 1.22
PTCHD3P2-201ENST00000424937 CDX4O14627 284 aaPredicted RBP22.68■■□□□ 1.22
PTCHD3P2-201ENST00000424937 MTA2O94776 668 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms