RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 CNTN1Q12860 1018 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 KRT81Q14533 505 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TEAD4Q15561 434 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 SMTNL2Q2TAL5 461 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 CARD16Q5EG05 197 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 KCNT1Q5JUK3 1230 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 KIAA0895LQ68EN5 471 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TBC1D3GQ6DHY5 549 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TBC1D3CQ6IPX1 549 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 NCEH1Q6PIU2 408 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 DPY19L3Q6ZPD9 716 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TBC1D3Q8IZP1 549 aaPredicted RBP11.15□□□□□ -0.62
USP49-204ENST00000423567 AADATQ8N5Z0 425 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 GRIN3AQ8TCU5 1115 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TEKT4Q8WW24 435 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 ISG20Q96AZ6 181 aaKnown RBP11.15□□□□□ -0.62
USP49-204ENST00000423567 ARHGEF26Q96DR7 871 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 HMCESQ96FZ2 354 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 MRFAP1L1Q96HT8 127 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 BTBD6Q96KE9 485 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 PEBP4Q96S96 227 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 HEPHQ9BQS7 1158 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 GTPBP2Q9BX10 602 aaKnown RBP11.15□□□□□ -0.62
USP49-204ENST00000423567 RBSNQ9H1K0 784 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 RXFP3Q9NSD7 469 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.15□□□□□ -0.62
USP49-204ENST00000423567 HECAQ9UBI9 543 aaPredicted RBP11.15□□□□□ -0.62
USP49-204ENST00000423567 SERGEFQ9UGK8 458 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 SARDHQ9UL12 918 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 NENFQ9UMX5 172 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 ZNF292O60281 2723 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 GSRP00390 522 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 ERCC2P18074 760 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 ZNF75DP51815 510 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 AFF3P51826 1226 aaKnown RBP11.14□□□□□ -0.63
USP49-204ENST00000423567 CCNHP51946 323 aaPredicted RBP11.14□□□□□ -0.63
USP49-204ENST00000423567 ADPRHP54922 357 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 TBX2Q13207 712 aaPredicted RBP11.14□□□□□ -0.63
USP49-204ENST00000423567 SERINC3Q13530 473 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 DPYSL2Q16555 572 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 ASTE1Q2TB18 679 aaPredicted RBP11.14□□□□□ -0.63
USP49-204ENST00000423567 UAP1L1Q3KQV9 507 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 POM121L1PQ3SYA9 428 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 INO80DQ53TQ3 878 aaPredicted RBP11.14□□□□□ -0.63
USP49-204ENST00000423567 ZFYVE27Q5T4F4 411 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 IL27RAQ6UWB1 636 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 ERMP1Q7Z2K6 904 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 ADAT2Q7Z6V5 191 aaKnown RBP11.14□□□□□ -0.63
USP49-204ENST00000423567 LZTR1Q8N653 840 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 CHST14Q8NCH0 376 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 SKA1Q96BD8 255 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 BIRC7Q96CA5 298 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 LRIG1Q96JA1 1093 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 GDAP1L1Q96MZ0 367 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 CHP1Q99653 195 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 PACSIN1Q9BY11 444 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 TM6SF2Q9BZW4 377 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 ZDHHC5Q9C0B5 715 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 ZDHHC6Q9H6R6 413 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 CAPN10Q9HC96 672 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 LUC7LQ9NQ29 371 aaKnown RBP11.14□□□□□ -0.63
USP49-204ENST00000423567 SPTLC3Q9NUV7 552 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 UBA2Q9UBT2 640 aaPredicted RBP11.14□□□□□ -0.63
USP49-204ENST00000423567 VPS9D1Q9Y2B5 631 aa11.14□□□□□ -0.63
USP49-204ENST00000423567 A0A1W2PPC4 97 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 DCDC2BA2VCK2 349 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 DFFAO00273 331 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 PLK4O00444 970 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 KRIT1O00522 736 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 PLRG1O43660 514 aaKnown RBP11.13□□□□□ -0.63
USP49-204ENST00000423567 OPHN1O60890 802 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 ZNF821O75541 412 aaPredicted RBP11.13□□□□□ -0.63
USP49-204ENST00000423567 LEFTY1O75610 366 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 TMCC1O94876 653 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 PROSCO94903 275 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 POP4O95707 220 aaKnown RBP11.13□□□□□ -0.63
USP49-204ENST00000423567 CD160O95971 181 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 IGSF6O95976 241 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 CTSLP07711 333 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 RARAP10276 462 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 IL1R2P27930 398 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 SERPINB6P35237 376 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 DRD3P35462 400 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 GJC1P36383 396 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 NUDT1P36639 197 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 CCR5P51681 352 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 RHOAP61586 193 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 SLC45A4Q5BKX6 768 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 AGBL4Q5VU57 503 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 TMCO3Q6UWJ1 677 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 LEKR1Q6ZMV7 388 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 CYP4V2Q6ZWL3 525 aaPredicted RBP11.13□□□□□ -0.63
USP49-204ENST00000423567 ERN2Q76MJ5 926 aaKnown RBP11.13□□□□□ -0.63
USP49-204ENST00000423567 PRPF39Q86UA1 669 aaKnown RBP11.13□□□□□ -0.63
USP49-204ENST00000423567 RHOT2Q8IXI1 618 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 OR2AP1Q8NGE2 309 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 CELF6Q96J87 481 aaKnown RBP11.13□□□□□ -0.63
USP49-204ENST00000423567 OSBPL1AQ9BXW6 950 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 NOL6Q9H6R4 1146 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms