RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TMPRSS6Q8IU80 811 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 LRRC49Q8IUZ0 686 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 SLC35F6Q8N357 371 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 ATPAF2Q8N5M1 289 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 CCNYQ8ND76 341 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 MDGA1Q8NFP4 955 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 OR2A12Q8NGT7 310 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 OR2T3Q8NH03 318 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 HAUS1Q96CS2 278 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 MRGPRX1Q96LB2 322 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 FAM129BQ96TA1 746 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 LGMNQ99538 433 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 TLR10Q9BXR5 811 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 TM6SF2Q9BZW4 377 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 CEP44Q9C0F1 390 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 MKRN2Q9H000 416 aaKnown RBP9.44□□□□□ -0.9
PDGFC-202ENST00000422544 BCCIPQ9P287 314 aaKnown RBP eCLIP9.44□□□□□ -0.9
PDGFC-202ENST00000422544 DOCK4Q8N1I0 1966 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 CNOT1A5YKK6 2376 aaKnown RBP9.44□□□□□ -0.9
PDGFC-202ENST00000422544 AXIN1O15169 862 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 TJP3O95049 919 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 PEX11BO96011 259 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 NDUFV2P19404 249 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 TGM2P21980 687 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 HOXA6P31267 233 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 PTPN7P35236 360 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 RECQLP46063 649 aaPredicted RBP9.43□□□□□ -0.9
PDGFC-202ENST00000422544 ID4P47928 161 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 NR2C2P49116 596 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 RHOAP61586 193 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 SLC10A7Q0GE19 358 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 LBRQ14739 615 aaKnown RBP9.43□□□□□ -0.9
PDGFC-202ENST00000422544 PDK1Q15118 436 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 CARD16Q5EG05 197 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 ATXN7L2Q5T6C5 722 aaPredicted RBP9.43□□□□□ -0.9
PDGFC-202ENST00000422544 CCDC181Q5TID7 509 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 KIAA1324Q6UXG2 1013 aaKnown RBP9.43□□□□□ -0.9
PDGFC-202ENST00000422544 DPY19L3Q6ZPD9 716 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 RASSF3Q86WH2 238 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 MMAAQ8IVH4 418 aaKnown RBP9.43□□□□□ -0.9
PDGFC-202ENST00000422544 RYBPQ8N488 228 aaPredicted RBP9.43□□□□□ -0.9
PDGFC-202ENST00000422544 PCDH20Q8N6Y1 951 aaKnown RBP9.43□□□□□ -0.9
PDGFC-202ENST00000422544 CHST14Q8NCH0 376 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 OR6K2Q8NGY2 324 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 CASKIN2Q8WXE0 1202 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 P3H4Q92791 437 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 ISG20Q96AZ6 181 aaKnown RBP9.43□□□□□ -0.9
PDGFC-202ENST00000422544 SIPA1Q96FS4 1042 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 TSGA13Q96PP4 275 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 TPSD1Q9BZJ3 242 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 RSPH9Q9H1X1 276 aaPredicted RBP9.43□□□□□ -0.9
PDGFC-202ENST00000422544 KCND1Q9NSA2 647 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 EBF1Q9UH73 591 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 INVSQ9Y283 1065 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 EFR3BQ9Y2G0 817 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 JRKLQ9Y4A0 524 aa9.43□□□□□ -0.9
PDGFC-202ENST00000422544 FASNP49327 2511 aaKnown RBP9.43□□□□□ -0.9
PDGFC-202ENST00000422544 ANKRD11Q6UB99 2663 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 TCRBV7S2A1N4TA0A589 114 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 RNF103O00237 685 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 MCF2LO15068 1137 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 MUSKO15146 869 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 MATN3O15232 486 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 RNASEH1O60930 286 aaKnown RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 IL1BP01584 269 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 ATP1A1P05023 1023 aaKnown RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 CCNCP24863 283 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 MSNP26038 577 aaKnown RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 GKP32189 559 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 CHRNA3P32297 505 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 CXCR5P32302 372 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 NRLP54845 237 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 GNG11P61952 73 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 RPS14P62263 151 aaKnown RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 SNRPD1P62314 119 aaKnown RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 AP1B1Q10567 949 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 ELAVL3Q14576 367 aaKnown RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 RFTN1Q14699 578 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 MYLK3Q32MK0 819 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 ZNF528Q3MIS6 628 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 POM121L1PQ3SYA9 428 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 ARSIQ5FYB1 569 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 FAM182AQ5T1J6 154 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 SEL1L2Q5TEA6 688 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 TMCO4Q5TGY1 634 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 MARC1Q5VT66 337 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 ZNF776Q68DI1 518 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 BZW1Q7L1Q6 419 aaKnown RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 METTL3Q86U44 580 aaKnown RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 ZC3H18Q86VM9 953 aaKnown RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 LONP2Q86WA8 852 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 PLPP6Q8IY26 295 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 CCDC13Q8IYE1 715 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 TSEN2Q8NCE0 465 aaKnown RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 OR2AP1Q8NGE2 309 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 NSMCE1Q8WV22 266 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 RLN3Q8WXF3 142 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 OR8D1Q8WZ84 308 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 PRCCQ92733 491 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 HDAC11Q96DB2 347 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms