RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 A0A1W2PPC4 97 aa22.33■■□□□ 1.17
TRAF4-204ENST00000422344 EIF3CLB5ME19 914 aaKnown RBP22.33■■□□□ 1.17
TRAF4-204ENST00000422344 GRIA4P48058 902 aa22.33■■□□□ 1.17
TRAF4-204ENST00000422344 ERMARDQ5T6L9 678 aa22.33■■□□□ 1.17
TRAF4-204ENST00000422344 DPY19L3Q6ZPD9 716 aa22.33■■□□□ 1.17
TRAF4-204ENST00000422344 RYBPQ8N488 228 aaPredicted RBP22.33■■□□□ 1.17
TRAF4-204ENST00000422344 CHCHD4Q8N4Q1 142 aa22.33■■□□□ 1.17
TRAF4-204ENST00000422344 CHST14Q8NCH0 376 aa22.33■■□□□ 1.17
TRAF4-204ENST00000422344 RNF214Q8ND24 703 aa22.33■■□□□ 1.17
TRAF4-204ENST00000422344 PPP1R16AQ96I34 528 aa22.33■■□□□ 1.17
TRAF4-204ENST00000422344 EIF3CQ99613 913 aaKnown RBP22.33■■□□□ 1.17
TRAF4-204ENST00000422344 GPATCH2LQ9NWQ4 482 aa22.33■■□□□ 1.17
TRAF4-204ENST00000422344 SLCO1B1Q9Y6L6 691 aa22.33■■□□□ 1.17
TRAF4-204ENST00000422344 NBEAQ8NFP9 2946 aa22.33■■□□□ 1.16
TRAF4-204ENST00000422344 ZSCAN5CA6NGD5 496 aaPredicted RBP22.32■■□□□ 1.16
TRAF4-204ENST00000422344 EEF2KO00418 725 aaKnown RBP22.32■■□□□ 1.16
TRAF4-204ENST00000422344 DAPK3O43293 454 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 PLRG1O43660 514 aaKnown RBP22.32■■□□□ 1.16
TRAF4-204ENST00000422344 KDELR3O43731 214 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 TRIM16O95361 564 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 CTSLP07711 333 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 TPM1P09493 284 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 CD59P13987 128 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 C21orf59P57076 290 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 YBEYP58557 167 aaPredicted RBP22.32■■□□□ 1.16
TRAF4-204ENST00000422344 RACK1P63244 317 aaKnown RBP22.32■■□□□ 1.16
TRAF4-204ENST00000422344 SLC14A1Q13336 389 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 TRIM14Q14142 442 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 CARD16Q5EG05 197 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 ARSIQ5FYB1 569 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 AGBL4Q5VU57 503 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 SPECC1LQ69YQ0 1117 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 SKA1Q96BD8 255 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 TRIM7Q9C029 511 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 GAREM1Q9H706 876 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 AASDHPPTQ9NRN7 309 aa22.32■■□□□ 1.16
TRAF4-204ENST00000422344 FREM2Q5SZK8 3169 aa22.31■■□□□ 1.16
TRAF4-204ENST00000422344 WASH4PA8MWX3 477 aa22.31■■□□□ 1.16
TRAF4-204ENST00000422344 BUB1O43683 1085 aa22.31■■□□□ 1.16
TRAF4-204ENST00000422344 MIPP30301 263 aa22.31■■□□□ 1.16
TRAF4-204ENST00000422344 CCNHP51946 323 aaPredicted RBP22.31■■□□□ 1.16
TRAF4-204ENST00000422344 HLA-BQ31612 363 aa22.31■■□□□ 1.16
TRAF4-204ENST00000422344 PARP15Q460N3 678 aa22.31■■□□□ 1.16
TRAF4-204ENST00000422344 PRPF39Q86UA1 669 aaKnown RBP22.31■■□□□ 1.16
TRAF4-204ENST00000422344 FAM131CQ96AQ9 280 aa22.31■■□□□ 1.16
TRAF4-204ENST00000422344 ISG20Q96AZ6 181 aaKnown RBP22.31■■□□□ 1.16
TRAF4-204ENST00000422344 SLC6A18Q96N87 628 aa22.31■■□□□ 1.16
TRAF4-204ENST00000422344 HEPHQ9BQS7 1158 aa22.31■■□□□ 1.16
TRAF4-204ENST00000422344 SNRNP25Q9BV90 132 aaKnown RBP22.31■■□□□ 1.16
TRAF4-204ENST00000422344 TM6SF2Q9BZW4 377 aa22.31■■□□□ 1.16
TRAF4-204ENST00000422344 ANKRD6Q9Y2G4 727 aa22.31■■□□□ 1.16
TRAF4-204ENST00000422344 ACTL7AQ9Y615 435 aa22.31■■□□□ 1.16
TRAF4-204ENST00000422344 FASNP49327 2511 aaKnown RBP22.3■■□□□ 1.16
TRAF4-204ENST00000422344 A0A087X0T9 212 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 RASA4BC9J798 803 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 RASA4O43374 803 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 LEFTY1O75610 366 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 FAM228BP0C875 321 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 PPP2CBP62714 309 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 PPP2CAP67775 309 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 ACAP1Q15027 740 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 TSR1Q2NL82 804 aaKnown RBP22.3■■□□□ 1.16
TRAF4-204ENST00000422344 KIF19Q2TAC6 998 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 SLC45A4Q5BKX6 768 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 PPP6R3Q5H9R7 873 aaPredicted RBP22.3■■□□□ 1.16
TRAF4-204ENST00000422344 CCDC122Q5T0U0 273 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 ALKBH5Q6P6C2 394 aaKnown RBP22.3■■□□□ 1.16
TRAF4-204ENST00000422344 LEKR1Q6ZMV7 388 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 ARFGAP1Q8N6T3 406 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 ARRDC3Q96B67 414 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 SERAC1Q96JX3 654 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 CAMK1GQ96NX5 476 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 PEBP4Q96S96 227 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 ORAI3Q9BRQ5 295 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 THAP2Q9H0W7 228 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 ZDHHC6Q9H6R6 413 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 PREBQ9HCU5 417 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 ZNHIT6Q9NWK9 470 aaKnown RBP22.3■■□□□ 1.16
TRAF4-204ENST00000422344 HECAQ9UBI9 543 aaPredicted RBP22.3■■□□□ 1.16
TRAF4-204ENST00000422344 LHX6Q9UPM6 363 aa22.3■■□□□ 1.16
TRAF4-204ENST00000422344 SH3BP5O60239 455 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 LRCH4O75427 683 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 ZNF821O75541 412 aaPredicted RBP22.29■■□□□ 1.16
TRAF4-204ENST00000422344 CD160O95971 181 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 NUDT1P36639 197 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 SNRPD1P62314 119 aaKnown RBP22.29■■□□□ 1.16
TRAF4-204ENST00000422344 BNC1Q01954 994 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 CA9Q16790 459 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 ZNF423Q2M1K9 1284 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 PIP5KL1Q5T9C9 394 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 LAYNQ6UX15 382 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 ERN2Q76MJ5 926 aaKnown RBP22.29■■□□□ 1.16
TRAF4-204ENST00000422344 PSTKQ8IV42 348 aaKnown RBP22.29■■□□□ 1.16
TRAF4-204ENST00000422344 UMODL1-AS1Q8N2C9 162 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 CASKIN2Q8WXE0 1202 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 HMCESQ96FZ2 354 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 NOL6Q9H6R4 1146 aaKnown RBP22.29■■□□□ 1.16
TRAF4-204ENST00000422344 ARHGAP20Q9P2F6 1191 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 SNX11Q9Y5W9 270 aa22.29■■□□□ 1.16
TRAF4-204ENST00000422344 WASF2Q9Y6W5 498 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms